Variant report
| Variant | rs1882373 |
|---|---|
| Chromosome Location | chr2:209442473-209442474 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs10198932 | 0.87[ASN][1000 genomes] |
| rs10497902 | 0.83[YRI][hapmap];0.86[AFR][1000 genomes] |
| rs1074572 | 0.88[ASN][1000 genomes] |
| rs12472161 | 0.84[ASN][1000 genomes] |
| rs12476735 | 0.87[AFR][1000 genomes] |
| rs13006919 | 0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs13420044 | 0.86[ASN][1000 genomes] |
| rs1367048 | 0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1377907 | 0.83[JPT][hapmap] |
| rs1437418 | 0.82[JPT][hapmap] |
| rs1816613 | 0.83[JPT][hapmap] |
| rs1835303 | 0.87[ASN][1000 genomes] |
| rs2059963 | 0.83[JPT][hapmap] |
| rs2061013 | 0.83[JPT][hapmap] |
| rs2115771 | 0.87[ASN][1000 genomes] |
| rs2195574 | 0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34707921 | 0.87[ASN][1000 genomes] |
| rs34776990 | 0.87[ASN][1000 genomes] |
| rs3769516 | 0.83[JPT][hapmap] |
| rs3769517 | 0.82[JPT][hapmap] |
| rs3820902 | 0.82[JPT][hapmap] |
| rs4673415 | 0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs4675769 | 0.83[JPT][hapmap] |
| rs4675770 | 0.83[JPT][hapmap] |
| rs4675772 | 0.82[JPT][hapmap] |
| rs6435464 | 0.82[JPT][hapmap] |
| rs6726003 | 0.83[JPT][hapmap] |
| rs6755377 | 0.82[JPT][hapmap] |
| rs6756807 | 0.87[ASN][1000 genomes] |
| rs930121 | 0.85[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:209438800-209459400 | Weak transcription | K562 | blood |
