Variant report

Variant rs1888958
Chromosome Location chr6:131244819-131244820
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131220600-131281200 Weak transcription Fetal Adrenal Gland Adrenal Gland
2 chr6:131222200-131248400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:131222200-131251800 Weak transcription Primary B cells from cord blood blood
4 chr6:131222400-131248600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:131228800-131245800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr6:131229400-131245200 Weak transcription Adipose Nuclei Adipose
7 chr6:131229600-131245400 Weak transcription NHLF lung
8 chr6:131229600-131248600 Weak transcription Stomach Mucosa stomach
9 chr6:131229600-131249600 Weak transcription Osteobl bone
10 chr6:131234000-131250200 Weak transcription Ovary ovary
11 chr6:131234000-131250600 Weak transcription Fetal Stomach stomach
12 chr6:131234600-131248600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:131234600-131249400 Weak transcription Primary hematopoietic stem cells blood
14 chr6:131234600-131250200 Weak transcription Pancreas Pancrea
15 chr6:131234800-131245000 Weak transcription HSMM muscle
16 chr6:131234800-131246800 Weak transcription Primary B cells from peripheral blood blood
17 chr6:131234800-131247200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr6:131234800-131254000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr6:131234800-131266600 Weak transcription GM12878-XiMat blood
20 chr6:131236400-131254000 Weak transcription H9 Cell Line embryonic stem cell
21 chr6:131238400-131248800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:131238400-131249800 Weak transcription Colon Smooth Muscle Colon
23 chr6:131238400-131250200 Weak transcription Aorta Aorta
24 chr6:131239200-131252600 Weak transcription Dnd41 blood
25 chr6:131240000-131253600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr6:131242200-131249600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr6:131242400-131247600 Strong transcription HepG2 liver
28 chr6:131242600-131254800 Weak transcription Fetal Kidney kidney
29 chr6:131242800-131247200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:131242800-131255000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr6:131244000-131248000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:131244200-131245000 Genic enhancers Fetal Muscle Leg muscle
33 chr6:131244200-131245000 Enhancers Small Intestine intestine
34 chr6:131244200-131246200 Strong transcription Fetal Lung lung
35 chr6:131244200-131249400 Weak transcription NHDF-Ad bronchial
36 chr6:131244200-131250000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:131244200-131279000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr6:131244400-131245000 Enhancers Brain Hippocampus Middle brain
39 chr6:131244400-131245000 Enhancers Sigmoid Colon Sigmoid Colon
40 chr6:131244600-131245000 Genic enhancers Fetal Muscle Trunk muscle
41 chr6:131244600-131245000 Enhancers Left Ventricle heart
42 chr6:131244600-131245400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr6:131244600-131246800 Weak transcription Brain Anterior Caudate brain
44 chr6:131244800-131245000 Enhancers Brain Substantia Nigra brain
45 chr6:131244800-131245400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:131244800-131245400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr6:131244800-131249800 Weak transcription HSMMtube muscle
48 chr6:131244800-131255000 Weak transcription Lung lung

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