Variant report

Variant	rs1891520
Chromosome Location	chr6:16045672-16045673
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1267720	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1342745	1.00[AMR][1000 genomes]
rs2327946	1.00[AMR][1000 genomes]
rs4352685	1.00[AMR][1000 genomes]
rs4502936	1.00[AMR][1000 genomes]
rs6459444	1.00[AMR][1000 genomes]
rs6921913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6925676	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6931835	1.00[AMR][1000 genomes]
rs7453386	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7749125	1.00[AMR][1000 genomes]
rs7755207	1.00[AFR][1000 genomes]
rs7771374	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs808367	1.00[AMR][1000 genomes]
rs9464855	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv462642	chr6:16019115-16056026	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv601007	chr6:16019115-16056026	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:16044600-16047600	Enhancers	K562	blood
2	chr6:16044600-16058800	Weak transcription	Right Atrium	heart
3	chr6:16044800-16047800	Weak transcription	Fetal Intestine Small	intestine
4	chr6:16045400-16046000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:16045600-16046000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:16045600-16046000	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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