Variant report

Variant	rs7749125
Chromosome Location	chr6:15996880-15996881
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:15990993..15994217-chr6:15996563..15999465,4	K562	blood:
2	chr6:15996739..15999476-chr6:16120909..16122978,2	K562	blood:
3	chr6:15991124..16001483-chr6:16127509..16131702,13	K562	blood:
4	chr6:15996145..15997886-chr6:16143670..16145382,2	K562	blood:
5	chr6:15993338..15997326-chr6:16127459..16131055,7	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

rs_ID	r²[population]
rs1267720	1.00[AMR][1000 genomes]
rs1342745	1.00[AMR][1000 genomes]
rs1891520	1.00[AMR][1000 genomes]
rs2327946	1.00[AMR][1000 genomes]
rs4352685	1.00[AMR][1000 genomes]
rs4502936	1.00[AMR][1000 genomes]
rs6459444	1.00[AMR][1000 genomes]
rs6921913	1.00[AMR][1000 genomes]
rs6925676	1.00[AMR][1000 genomes]
rs6931835	1.00[AMR][1000 genomes]
rs7453386	1.00[AMR][1000 genomes]
rs7771374	1.00[AMR][1000 genomes]
rs808367	1.00[AMR][1000 genomes]
rs9464855	1.00[AMR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15994000-15998600	Enhancers	Adipose Nuclei	Adipose
2	chr6:15994000-15999000	Enhancers	Fetal Intestine Small	intestine
3	chr6:15994200-15998400	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr6:15994200-15999000	Enhancers	Fetal Intestine Large	intestine
5	chr6:15994400-15997800	Weak transcription	Placenta	Placenta
6	chr6:15994400-15997800	Weak transcription	Left Ventricle	heart
7	chr6:15994400-15998000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr6:15994600-15997800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr6:15994800-15998200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr6:15994800-15999000	Enhancers	HUVEC	blood vessel
11	chr6:15995000-15998200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:15995200-15998400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr6:15995400-15998000	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr6:15995400-15999600	Weak transcription	Lung	lung
15	chr6:15995600-15997800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr6:15995600-15998000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr6:15996200-15998000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr6:15996400-15998200	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr6:15996600-15997400	Weak transcription	Primary hematopoietic stem cells	blood
20	chr6:15996600-15997600	Weak transcription	Brain Hippocampus Middle	brain
21	chr6:15996600-15997800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr6:15996600-15999600	Weak transcription	Ovary	ovary
23	chr6:15996800-15997800	Weak transcription	Fetal Lung	lung
24	chr6:15996800-15998400	Enhancers	K562	blood

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