Variant report

Variant	rs1897682
Chromosome Location	chr8:130519014-130519015
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10097701	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap]
rs12677044	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12681345	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16893242	0.98[EUR][1000 genomes]
rs16904082	0.93[CEU][hapmap];0.89[CHB][hapmap];0.94[JPT][hapmap]
rs16904090	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1897683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58145321	0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72714272	0.87[EUR][1000 genomes]
rs973006	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130503600-130519600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:130515200-130519400	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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