Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:119872807..119875154-chr8:119954620..119956475,2	MCF-7	breast:
2	chr8:119872555..119876115-chr8:119889180..119893027,6	MCF-7	breast:
3	chr8:119858424..119862696-chr8:119871744..119874668,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11573806	1.00[MEX][hapmap]
rs11573900	1.00[MEX][hapmap]
rs12375328	1.00[MEX][hapmap]
rs16891570	0.91[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1804854	1.00[MEX][hapmap]
rs4520195	1.00[MEX][hapmap];0.86[YRI][hapmap]
rs56049457	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs56227038	0.89[AMR][1000 genomes]
rs59029960	0.89[AMR][1000 genomes]
rs59676695	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs60574576	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61694778	0.89[AMR][1000 genomes]
rs73317598	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319603	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319615	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319620	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319628	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319632	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73319643	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73709373	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73709374	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73709377	0.89[AMR][1000 genomes]
rs7815884	1.00[MEX][hapmap]
rs7833877	1.00[MEX][hapmap]
rs882763	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv517081	chr8:119872439-119886889	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119870200-119873400	Weak transcription	Fetal Intestine Small	intestine
2	chr8:119872800-119873400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:119872800-119874200	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr8:119872800-119874400	Enhancers	Fetal Lung	lung
5	chr8:119872800-119875200	Enhancers	Fetal Intestine Large	intestine
6	chr8:119873000-119873200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr8:119873000-119873400	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr8:119873000-119873800	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr8:119873000-119874000	Weak transcription	GM12878-XiMat	blood

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