Variant report

Variant	rs1927846
Chromosome Location	chr13:54081625-54081626
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs17636906	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1887759	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66481867	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67856164	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9527093	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9536446	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9536450	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9536451	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:54079000-54082200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr13:54079200-54082000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr13:54080800-54082000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr13:54081400-54082600	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr13:54081400-54082800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr13:54081600-54082000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr13:54081600-54082600	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr13:54081600-54082600	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr13:54081600-54082800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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