Variant report

Variant	rs1927849
Chromosome Location	chr13:54112767-54112768
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1927850	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1927851	0.89[ASN][1000 genomes]
rs1927855	0.95[EUR][1000 genomes]
rs1927857	0.90[ASN][1000 genomes]
rs4625607	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73192245	0.90[ASN][1000 genomes]
rs7321408	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7328372	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8002318	0.90[ASN][1000 genomes]
rs9316628	0.90[ASN][1000 genomes]
rs9527094	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9527095	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9527096	0.90[ASN][1000 genomes]
rs9527099	0.90[ASN][1000 genomes]
rs9536447	0.90[ASN][1000 genomes]
rs9536448	0.90[ASN][1000 genomes]
rs9536449	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051015	chr13:54100401-54125854	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:54111800-54112800	Weak transcription	Fetal Brain Female	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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