Variant report

Variant	rs9527094
Chromosome Location	chr13:54089260-54089261
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1927849	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1927850	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1927851	0.91[ASN][1000 genomes]
rs1927855	0.91[EUR][1000 genomes]
rs1927857	0.92[ASN][1000 genomes]
rs4625607	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73192245	0.92[ASN][1000 genomes]
rs7321408	0.86[EUR][1000 genomes]
rs7328372	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8002318	0.92[ASN][1000 genomes]
rs9316628	0.92[ASN][1000 genomes]
rs9527095	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9527096	0.92[ASN][1000 genomes]
rs9527099	0.92[ASN][1000 genomes]
rs9536447	0.92[ASN][1000 genomes]
rs9536448	0.92[ASN][1000 genomes]
rs9536449	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:54088800-54094200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr13:54088800-54094200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr13:54088800-54094200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr13:54088800-54094200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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