| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1010722 |
chr2:35072575-35950219 |
Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1001841 |
chr2:35286152-35483863 |
Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1002840 |
chr2:35287783-35535329 |
Weak transcription Bivalent Enhancer Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv581389 |
chr2:35289330-35558345 |
Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv999466 |
chr2:35346540-35535329 |
Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv535635 |
chr2:35346540-35535329 |
Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv873842 |
chr2:35367230-35652916 |
Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv833747 |
chr2:35388633-35568213 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv519522 |
chr2:35425529-35861883 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv873843 |
chr2:35443833-35551496 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv1007922 |
chr2:35447551-35582768 |
Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv1008651 |
chr2:35469467-35896486 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv963222 |
chr2:35471871-35474642 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
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