Variant report

Variant rs1936011
Chromosome Location chr20:23341912-23341913
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23338800-23342000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr20:23338800-23342000 Weak transcription Gastric stomach
3 chr20:23339200-23342000 Weak transcription Aorta Aorta
4 chr20:23339200-23342200 Weak transcription Spleen Spleen
5 chr20:23341000-23342200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr20:23341200-23342000 Flanking Active TSS Liver Liver
7 chr20:23341200-23342000 Flanking Active TSS K562 blood
8 chr20:23341200-23342400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr20:23341200-23343600 Active TSS HUES6 Cell Line embryonic stem cell
10 chr20:23341400-23342000 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr20:23341400-23342000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
12 chr20:23341400-23342000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr20:23341400-23342000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr20:23341400-23342000 Flanking Active TSS Colon Smooth Muscle Colon
15 chr20:23341400-23342000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
16 chr20:23341400-23342000 Flanking Active TSS A549 lung
17 chr20:23341400-23342200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
18 chr20:23341400-23342200 Flanking Active TSS Muscle Satellite Cultured Cells --
19 chr20:23341400-23342200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
20 chr20:23341400-23342200 Flanking Active TSS Dnd41 blood
21 chr20:23341400-23342200 Flanking Active TSS GM12878-XiMat blood
22 chr20:23341400-23342200 Flanking Active TSS NHLF lung
23 chr20:23341400-23342400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
24 chr20:23341400-23342400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr20:23341400-23342400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
26 chr20:23341400-23342400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
27 chr20:23341400-23343800 Active TSS HUES64 Cell Line embryonic stem cell
28 chr20:23341600-23342000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr20:23341600-23342000 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr20:23341600-23342000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
31 chr20:23341600-23342000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
32 chr20:23341600-23342000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
33 chr20:23341600-23342000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr20:23341600-23342000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
35 chr20:23341600-23342000 Flanking Active TSS Primary T cells from cord blood blood
36 chr20:23341600-23342000 Flanking Active TSS Brain Angular Gyrus brain
37 chr20:23341600-23342000 Flanking Active TSS Brain Anterior Caudate brain
38 chr20:23341600-23342000 Flanking Active TSS Brain Cingulate Gyrus brain
39 chr20:23341600-23342000 Flanking Active TSS Brain Hippocampus Middle brain
40 chr20:23341600-23342000 Flanking Active TSS Fetal Intestine Large intestine
41 chr20:23341600-23342000 Flanking Active TSS Fetal Kidney kidney
42 chr20:23341600-23342000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
43 chr20:23341600-23342000 Flanking Active TSS Fetal Lung lung
44 chr20:23341600-23342000 Flanking Active TSS Stomach Smooth Muscle stomach
45 chr20:23341600-23342000 Flanking Active TSS HSMMtube muscle
46 chr20:23341600-23342000 Flanking Active TSS NHDF-Ad bronchial
47 chr20:23341600-23342000 Flanking Active TSS NHEK skin
48 chr20:23341600-23342200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr20:23341600-23342200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr20:23341600-23342200 Flanking Active TSS Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links