Variant report

Variant rs55851398
Chromosome Location chr20:23365601-23365602
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23344000-23392600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr20:23348000-23374200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr20:23348200-23384800 Weak transcription Stomach Mucosa stomach
4 chr20:23348800-23366400 Strong transcription Dnd41 blood
5 chr20:23349600-23366000 Strong transcription HepG2 liver
6 chr20:23351200-23371000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr20:23351200-23374000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr20:23351400-23374000 Weak transcription Fetal Brain Male brain
9 chr20:23352200-23367800 Weak transcription Small Intestine intestine
10 chr20:23352800-23376400 Strong transcription Primary monocytes fromperipheralblood blood
11 chr20:23353000-23378200 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr20:23353400-23372400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr20:23353400-23374200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr20:23354400-23389000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr20:23354400-23399800 Weak transcription Hela-S3 cervix
16 chr20:23354600-23374200 Weak transcription Rectal Smooth Muscle rectum
17 chr20:23354600-23375200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr20:23354800-23371000 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr20:23354800-23373600 Weak transcription Colonic Mucosa Colon
20 chr20:23356600-23374200 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr20:23356800-23368800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr20:23357000-23371200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr20:23357800-23370000 Weak transcription Brain Substantia Nigra brain
24 chr20:23358000-23366800 Weak transcription K562 blood
25 chr20:23358000-23371200 Weak transcription Esophagus oesophagus
26 chr20:23358000-23371200 Weak transcription NHEK skin
27 chr20:23358000-23373600 Weak transcription Right Ventricle heart
28 chr20:23358000-23374400 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr20:23358200-23367800 Weak transcription NH-A brain
30 chr20:23358200-23368600 Weak transcription Fetal Kidney kidney
31 chr20:23358200-23370600 Weak transcription Pancreas Pancrea
32 chr20:23358200-23373600 Weak transcription Brain Angular Gyrus brain
33 chr20:23358200-23377800 Weak transcription Placenta Amnion Placenta Amnion
34 chr20:23358400-23370600 Weak transcription H9 Cell Line embryonic stem cell
35 chr20:23358600-23367000 Weak transcription Brain Hippocampus Middle brain
36 chr20:23358600-23367400 Weak transcription HSMM muscle
37 chr20:23358600-23372400 Weak transcription HMEC breast
38 chr20:23358800-23370200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr20:23359000-23371200 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr20:23359600-23366200 Strong transcription Fetal Intestine Large intestine
41 chr20:23360200-23373600 Weak transcription NHLF lung
42 chr20:23360400-23371000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr20:23360600-23365800 Strong transcription Fetal Intestine Small intestine
44 chr20:23360800-23370600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr20:23361000-23368600 Weak transcription NHDF-Ad bronchial
46 chr20:23361200-23370200 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr20:23361200-23399600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr20:23361600-23370200 Weak transcription HSMMtube muscle
49 chr20:23361800-23368400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr20:23361800-23370000 Weak transcription Primary T helper cells PMA-I stimulated --

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