Variant report

Variant	rs1939935
Chromosome Location	chr11:121040910-121040911
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10892677	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11218161	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11218177	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11218178	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11218190	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11218195	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12787035	0.82[EUR][1000 genomes]
rs12792976	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12793460	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2186747	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2276057	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4280006	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs484492	0.85[AMR][1000 genomes]
rs7129267	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120994400-121042400	Weak transcription	Brain Hippocampus Middle	brain
2	chr11:120999600-121041600	Weak transcription	Brain Anterior Caudate	brain
3	chr11:121009000-121042800	Weak transcription	Pancreas	Pancrea
4	chr11:121017000-121042400	Weak transcription	Brain Substantia Nigra	brain
5	chr11:121024400-121041200	Weak transcription	Fetal Brain Female	brain
6	chr11:121025400-121041200	Weak transcription	Psoas Muscle	Psoas
7	chr11:121025600-121041600	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:121035600-121041600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr11:121039600-121041200	Weak transcription	Left Ventricle	heart
10	chr11:121039600-121055200	Weak transcription	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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