The 2.0 version of rSNPBase

Variant report

Variant rs1960603
Chromosome Location chr5:59045193-59045194
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59039400-59059800 Weak transcription Primary B cells from cord blood blood
2 chr5:59041000-59047000 Weak transcription Fetal Intestine Small intestine
3 chr5:59041600-59046400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:59041600-59049600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:59041600-59052200 Weak transcription Aorta Aorta
6 chr5:59042200-59047000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr5:59042200-59047000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:59042200-59047200 Weak transcription HSMMtube muscle
9 chr5:59042200-59047400 Weak transcription Osteobl bone
10 chr5:59042400-59053400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr5:59042600-59046200 Weak transcription NH-A brain
12 chr5:59042600-59046800 Weak transcription HMEC breast
13 chr5:59042600-59047000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr5:59042600-59047000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:59042600-59047200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:59042600-59047200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:59042600-59047200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr5:59042600-59047400 Weak transcription Placenta Amnion Placenta Amnion
19 chr5:59042600-59048000 Weak transcription Rectal Smooth Muscle rectum
20 chr5:59042600-59055400 Weak transcription Esophagus oesophagus
21 chr5:59042800-59047000 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:59042800-59047000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:59042800-59047000 Weak transcription HSMM muscle
24 chr5:59043000-59047000 Weak transcription HUVEC blood vessel
25 chr5:59043000-59047000 Weak transcription NHEK skin
26 chr5:59043200-59046400 Enhancers Hela-S3 cervix
27 chr5:59043200-59047000 Weak transcription Primary B cells from peripheral blood blood
28 chr5:59043800-59047400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr5:59044000-59045400 Weak transcription A549 lung
30 chr5:59044000-59048200 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015