The 2.0 version of rSNPBase

Variant report

Variant rs1962391
Chromosome Location chr7:50807047-50807048
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50773000-50807400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr7:50780600-50807600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr7:50787000-50807600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr7:50788000-50816000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr7:50789400-50811600 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr7:50789600-50807400 Weak transcription Esophagus oesophagus
7 chr7:50793200-50807200 Weak transcription Primary hematopoietic stem cells blood
8 chr7:50793800-50807200 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr7:50795200-50807400 Weak transcription H9 Cell Line embryonic stem cell
10 chr7:50798000-50812000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr7:50798600-50822600 Weak transcription Ovary ovary
12 chr7:50798800-50807400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr7:50798800-50810000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr7:50798800-50811400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr7:50798800-50815200 Weak transcription Aorta Aorta
16 chr7:50798800-50815200 Weak transcription Stomach Smooth Muscle stomach
17 chr7:50798800-50824800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr7:50798800-50832400 Weak transcription HSMM muscle
19 chr7:50798800-50837200 Weak transcription HSMMtube muscle
20 chr7:50799000-50807200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr7:50799000-50815200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr7:50799000-50817400 Weak transcription Rectal Smooth Muscle rectum
23 chr7:50799000-50823000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr7:50799200-50807200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr7:50799200-50807400 Weak transcription Fetal Lung lung
26 chr7:50799200-50811400 Weak transcription Fetal Brain Female brain
27 chr7:50799800-50807200 Weak transcription Brain Substantia Nigra brain
28 chr7:50800400-50811200 Weak transcription Fetal Stomach stomach
29 chr7:50801600-50807200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr7:50801600-50807600 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr7:50801600-50811400 Weak transcription Osteobl bone
32 chr7:50801600-50814400 Weak transcription Muscle Satellite Cultured Cells --
33 chr7:50802000-50807800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr7:50802000-50810600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr7:50802000-50811200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr7:50802000-50814200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr7:50802200-50807200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr7:50802200-50807200 Weak transcription Left Ventricle heart
39 chr7:50802200-50807200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr7:50802200-50807400 Weak transcription H1 Cell Line embryonic stem cell
41 chr7:50802200-50807400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr7:50802200-50807400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr7:50802200-50807400 Weak transcription Psoas Muscle Psoas
44 chr7:50802200-50807400 Weak transcription Spleen Spleen
45 chr7:50802200-50807600 Weak transcription Right Ventricle heart
46 chr7:50802200-50810000 Weak transcription Fetal Intestine Large intestine
47 chr7:50802200-50811200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr7:50802200-50815600 Weak transcription Placenta Placenta
49 chr7:50802400-50807400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr7:50802600-50813200 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015