Variant report

Variant	rs1964376
Chromosome Location	chr5:167529198-167529199
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:167528914..167530429-chr5:167530458..167532101,2	K562	blood:
2	chr5:167527475..167530414-chr5:167530458..167532043,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10076597	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11955988	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2569036	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2569040	0.86[ASN][1000 genomes]
rs2617969	0.80[ASN][1000 genomes]
rs36001918	0.81[ASN][1000 genomes]
rs7708643	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167513800-167536000	Weak transcription	NHDF-Ad	bronchial
2	chr5:167514000-167531200	Weak transcription	HSMMtube	muscle
3	chr5:167514200-167531400	Weak transcription	HSMM	muscle
4	chr5:167516200-167538400	Weak transcription	HMEC	breast
5	chr5:167516600-167532000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr5:167517400-167529200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr5:167517400-167539400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr5:167519200-167534800	Weak transcription	Esophagus	oesophagus
9	chr5:167521600-167529400	Weak transcription	Fetal Lung	lung
10	chr5:167522400-167530600	Weak transcription	Right Ventricle	heart
11	chr5:167524800-167532800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr5:167525400-167530600	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr5:167525400-167530800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr5:167525400-167531400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr5:167525800-167532000	Weak transcription	Fetal Kidney	kidney
16	chr5:167526600-167536800	Weak transcription	Left Ventricle	heart
17	chr5:167526800-167552800	Weak transcription	Fetal Heart	heart
18	chr5:167528400-167531200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr5:167528600-167532000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr5:167528800-167529200	Weak transcription	NHEK	skin

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