The 2.0 version of rSNPBase

Variant report

Variant rs1970142
Chromosome Location chr1:97701034-97701035
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97691400-97702600 Weak transcription Fetal Intestine Small intestine
2 chr1:97692800-97703400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:97693000-97701800 Weak transcription Fetal Lung lung
4 chr1:97694800-97712800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:97697000-97711000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:97697200-97710800 Weak transcription Osteobl bone
7 chr1:97697400-97711400 Weak transcription Brain Anterior Caudate brain
8 chr1:97697800-97704000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:97698000-97708000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:97699200-97702000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:97699200-97702000 Weak transcription Aorta Aorta
12 chr1:97699200-97704000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:97699200-97710800 Weak transcription Rectal Smooth Muscle rectum
14 chr1:97699400-97701200 Weak transcription Esophagus oesophagus
15 chr1:97699400-97701400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:97699400-97701800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:97699400-97702000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr1:97699400-97706800 Weak transcription Ovary ovary
19 chr1:97699400-97709400 Weak transcription Brain Substantia Nigra brain
20 chr1:97699400-97710800 Weak transcription Stomach Smooth Muscle stomach
21 chr1:97699400-97711000 Weak transcription Fetal Intestine Large intestine
22 chr1:97699400-97723600 Weak transcription Lung lung
23 chr1:97699600-97701200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:97699600-97701600 Weak transcription Primary hematopoietic stem cells blood
25 chr1:97699600-97702600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:97699600-97710000 Weak transcription Brain Cingulate Gyrus brain
27 chr1:97699600-97711000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:97699600-97711200 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr1:97699600-97711200 Weak transcription Brain Hippocampus Middle brain
30 chr1:97699600-97729000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:97699800-97702000 Weak transcription Duodenum Mucosa Duodenum
32 chr1:97699800-97710800 Weak transcription Adipose Nuclei Adipose
33 chr1:97700000-97702200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:97700000-97705600 Weak transcription Liver Liver
35 chr1:97700000-97710600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:97700000-97711400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr1:97700000-97717800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:97700200-97701800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:97700200-97702800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:97700400-97702200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:97700600-97702200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:97700600-97702200 Weak transcription HSMM muscle
43 chr1:97700600-97703400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:97700600-97706600 Weak transcription Primary T cells from cord blood blood
45 chr1:97700600-97710800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:97700600-97711400 Weak transcription Left Ventricle heart
47 chr1:97700600-97712200 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:97700600-97723600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:97700600-97733000 Weak transcription Dnd41 blood
50 chr1:97700800-97702600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015