The 2.0 version of rSNPBase

Variant report

Variant rs6683883
Chromosome Location chr1:97654795-97654796
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97620200-97658400 Weak transcription Lung lung
2 chr1:97626600-97660400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:97627600-97657800 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr1:97629400-97655800 Weak transcription NHDF-Ad bronchial
5 chr1:97629400-97658200 Weak transcription Stomach Smooth Muscle stomach
6 chr1:97635400-97658400 Weak transcription Primary T cells fromperipheralblood blood
7 chr1:97636000-97660400 Weak transcription Right Ventricle heart
8 chr1:97636800-97657000 Weak transcription Dnd41 blood
9 chr1:97639600-97658400 Weak transcription HSMM muscle
10 chr1:97639800-97658000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:97640000-97655800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:97640000-97655800 Weak transcription Aorta Aorta
13 chr1:97640000-97663000 Weak transcription Esophagus oesophagus
14 chr1:97640400-97657600 Weak transcription Adipose Nuclei Adipose
15 chr1:97641200-97658400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:97642000-97656800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:97643600-97660200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:97645400-97660200 Weak transcription Left Ventricle heart
19 chr1:97646200-97656800 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr1:97648200-97655800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:97648400-97656000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr1:97648400-97656000 Weak transcription Gastric stomach
23 chr1:97648800-97657200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:97648800-97659800 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr1:97649000-97659800 Strong transcription Primary monocytes fromperipheralblood blood
26 chr1:97649000-97661200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:97649600-97662400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:97650600-97655800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:97651800-97669800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:97652000-97658000 Weak transcription Fetal Lung lung
31 chr1:97652800-97658800 Strong transcription Primary B cells from cord blood blood
32 chr1:97653400-97660800 Weak transcription Ovary ovary
33 chr1:97653600-97659000 Strong transcription Liver Liver
34 chr1:97654000-97660200 Strong transcription Primary T cells from cord blood blood
35 chr1:97654200-97671200 Weak transcription Small Intestine intestine
36 chr1:97654400-97656400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:97654600-97656000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:97654600-97658000 Weak transcription Primary hematopoietic stem cells blood
39 chr1:97654600-97658200 Weak transcription Psoas Muscle Psoas
40 chr1:97654600-97659400 Strong transcription Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015