The 2.0 version of rSNPBase

Variant report

Variant rs688913
Chromosome Location chr1:97698224-97698225
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97660600-97698600 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:97663600-97698600 Weak transcription Primary T cells from cord blood blood
3 chr1:97678200-97698600 Weak transcription Left Ventricle heart
4 chr1:97690400-97698800 Weak transcription Brain Substantia Nigra brain
5 chr1:97690800-97698600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:97691400-97698600 Weak transcription Gastric stomach
7 chr1:97691400-97701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:97691400-97702600 Weak transcription Fetal Intestine Small intestine
9 chr1:97692800-97703400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:97693000-97701800 Weak transcription Fetal Lung lung
11 chr1:97693200-97700800 Weak transcription Pancreas Pancrea
12 chr1:97694000-97699600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:97694400-97698800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:97694600-97698600 Weak transcription Ovary ovary
15 chr1:97694800-97698600 Weak transcription Adipose Nuclei Adipose
16 chr1:97694800-97698600 Weak transcription Esophagus oesophagus
17 chr1:97694800-97698800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:97694800-97698800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:97694800-97701000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr1:97694800-97712800 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:97695000-97698600 Weak transcription Brain Cingulate Gyrus brain
22 chr1:97695000-97698600 Weak transcription Duodenum Mucosa Duodenum
23 chr1:97695000-97698600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:97695400-97698800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:97695800-97700000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:97696000-97698400 Weak transcription HSMM muscle
27 chr1:97696000-97698600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:97696000-97698800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:97696000-97701000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr1:97696200-97698600 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr1:97696800-97698400 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr1:97696800-97698600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:97696800-97698600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:97697000-97698600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:97697000-97698600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:97697000-97698600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:97697000-97698600 Weak transcription Brain Hippocampus Middle brain
38 chr1:97697000-97698600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:97697000-97698600 Weak transcription Fetal Brain Female brain
40 chr1:97697000-97698600 Weak transcription Fetal Intestine Large intestine
41 chr1:97697000-97698600 Weak transcription Rectal Smooth Muscle rectum
42 chr1:97697000-97700000 Strong transcription Liver Liver
43 chr1:97697000-97711000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:97697200-97698800 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:97697200-97698800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr1:97697200-97710800 Weak transcription Osteobl bone
47 chr1:97697400-97698600 Weak transcription Spleen Spleen
48 chr1:97697400-97699000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:97697400-97700000 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr1:97697400-97700600 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015