Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:36577490..36580113-chr6:36675769..36678702,3	K562	blood:
2	chr6:36674085..36676921-chr6:36682929..36685200,2	K562	blood:
3	chr6:36675406..36676950-chr6:36681349..36683776,2	K562	blood:

Variant related genes	Relation type
ENSG00000255587	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11750955	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11750982	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11753407	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12176359	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12526332	0.85[ASN][1000 genomes]
rs2395657	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2395660	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2894409	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35442158	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72853397	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7756867	0.95[ASN][1000 genomes]
rs9349006	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9349007	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9368955	0.84[EUR][1000 genomes]
rs9380589	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9380590	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9380591	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9380592	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9394373	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9394374	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9394376	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031191	chr6:36588974-36718015	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv538201	chr6:36588974-36718015	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv885808	chr6:36659932-36684518	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:36661400-36696400	Weak transcription	Right Atrium	heart
2	chr6:36669800-36681400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr6:36670000-36682200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr6:36671400-36682000	Weak transcription	Spleen	Spleen
5	chr6:36671800-36694000	Strong transcription	Primary monocytes fromperipheralblood	blood
6	chr6:36672200-36681400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr6:36672200-36693600	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr6:36672400-36679400	Weak transcription	Fetal Muscle Trunk	muscle
9	chr6:36675800-36682000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr6:36676200-36677000	Weak transcription	Monocytes-CD14+_RO01746	blood

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