The 2.0 version of rSNPBase

Variant report

Variant rs1976780
Chromosome Location chr4:57828102-57828103
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57793600-57842000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:57793600-57842000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:57798200-57828400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr4:57798200-57829600 Weak transcription Pancreas Pancrea
5 chr4:57798400-57828200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr4:57798600-57828200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr4:57803800-57828400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr4:57805000-57830800 Weak transcription Colonic Mucosa Colon
9 chr4:57819000-57828400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr4:57820200-57836000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr4:57820200-57836000 Weak transcription Esophagus oesophagus
12 chr4:57821200-57829400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:57821600-57832600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr4:57822600-57832600 Weak transcription Fetal Brain Male brain
15 chr4:57824000-57831400 Weak transcription Right Ventricle heart
16 chr4:57824400-57830400 Weak transcription Colon Smooth Muscle Colon
17 chr4:57824600-57828200 Weak transcription Duodenum Mucosa Duodenum
18 chr4:57824600-57828400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr4:57824600-57828400 Weak transcription Brain Germinal Matrix brain
20 chr4:57824600-57829000 Weak transcription Ovary ovary
21 chr4:57824600-57838400 Weak transcription Aorta Aorta
22 chr4:57824800-57828200 Weak transcription NH-A brain
23 chr4:57825000-57828200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr4:57825200-57828200 Weak transcription HSMM muscle
25 chr4:57825200-57828200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr4:57825200-57829200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr4:57825200-57829200 Weak transcription Brain Hippocampus Middle brain
28 chr4:57825200-57829400 Weak transcription Brain Angular Gyrus brain
29 chr4:57825200-57829400 Weak transcription Stomach Smooth Muscle stomach
30 chr4:57825200-57829400 Weak transcription HSMMtube muscle
31 chr4:57825200-57829600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr4:57825200-57829600 Weak transcription NHEK skin
33 chr4:57825200-57830600 Weak transcription Brain Substantia Nigra brain
34 chr4:57825200-57830800 Weak transcription HUVEC blood vessel
35 chr4:57825200-57832400 Weak transcription A549 lung
36 chr4:57825400-57828400 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr4:57825400-57829600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr4:57825400-57830600 Weak transcription Rectal Smooth Muscle rectum
39 chr4:57825400-57830600 Weak transcription K562 blood
40 chr4:57825400-57830800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr4:57825400-57831000 Weak transcription Fetal Kidney kidney
42 chr4:57825600-57828200 Weak transcription Primary B cells from cord blood blood
43 chr4:57825600-57828200 Weak transcription Osteobl bone
44 chr4:57825600-57829400 Weak transcription NHDF-Ad bronchial
45 chr4:57825600-57829600 Weak transcription HepG2 liver
46 chr4:57825600-57830400 Weak transcription NHLF lung
47 chr4:57825600-57832200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr4:57825600-57832600 Weak transcription Primary hematopoietic stem cells blood
49 chr4:57825600-57838600 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr4:57825800-57828200 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015