The 2.0 version of rSNPBase

Variant report

Variant rs73242616
Chromosome Location chr4:57806611-57806612
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57780800-57808200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr4:57793600-57842000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr4:57793600-57842000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr4:57797600-57807000 Weak transcription Gastric stomach
5 chr4:57797600-57811800 Weak transcription Stomach Mucosa stomach
6 chr4:57798000-57809400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr4:57798000-57814200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr4:57798200-57809600 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr4:57798200-57811800 Weak transcription Esophagus oesophagus
10 chr4:57798200-57828400 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr4:57798200-57829600 Weak transcription Pancreas Pancrea
12 chr4:57798400-57808200 Weak transcription Duodenum Mucosa Duodenum
13 chr4:57798400-57810800 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr4:57798400-57811800 Weak transcription Fetal Kidney kidney
15 chr4:57798400-57814000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:57798400-57828200 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr4:57798600-57828200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr4:57799400-57808600 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr4:57799800-57807400 Weak transcription Small Intestine intestine
20 chr4:57799800-57809000 Weak transcription HepG2 liver
21 chr4:57800000-57807200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr4:57800200-57811000 Weak transcription Primary B cells from peripheral blood blood
23 chr4:57800400-57809400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr4:57801800-57808600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr4:57802200-57807000 Strong transcription Fetal Stomach stomach
26 chr4:57802400-57806800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:57803800-57807400 Weak transcription A549 lung
28 chr4:57803800-57828400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr4:57804000-57807000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr4:57804000-57808800 Weak transcription Lung lung
31 chr4:57804200-57807200 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr4:57804200-57807200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr4:57804200-57808800 Weak transcription Osteobl bone
34 chr4:57804200-57810000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr4:57804200-57824200 Weak transcription NH-A brain
36 chr4:57804400-57808000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr4:57804400-57809000 Weak transcription HUVEC blood vessel
38 chr4:57804400-57811600 Weak transcription NHEK skin
39 chr4:57804600-57807000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr4:57804600-57809400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr4:57804800-57806800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr4:57804800-57807400 Weak transcription Fetal Muscle Leg muscle
43 chr4:57804800-57807600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr4:57804800-57807600 Weak transcription Ovary ovary
45 chr4:57804800-57809000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr4:57804800-57812400 Weak transcription Stomach Smooth Muscle stomach
47 chr4:57804800-57826600 Weak transcription Liver Liver
48 chr4:57805000-57806800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr4:57805000-57806800 Weak transcription Left Ventricle heart
50 chr4:57805000-57807000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015