Variant report

Variant rs1978618
Chromosome Location chr19:53426745-53426746
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53424400-53427200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:53425000-53427000 Active TSS HUES48 Cell Line embryonic stem cell
3 chr19:53425200-53427000 Active TSS K562 blood
4 chr19:53425400-53427000 Active TSS Rectal Mucosa Donor 29 rectum
5 chr19:53425400-53427200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr19:53425600-53427000 Active TSS H1 Cell Line embryonic stem cell
7 chr19:53425600-53427000 Active TSS H9 Cell Line embryonic stem cell
8 chr19:53425600-53427000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:53425600-53427000 Active TSS HUES64 Cell Line embryonic stem cell
10 chr19:53425600-53427000 Active TSS Esophagus oesophagus
11 chr19:53425600-53427000 Active TSS Fetal Intestine Large intestine
12 chr19:53425600-53427000 Active TSS Fetal Intestine Small intestine
13 chr19:53425600-53427000 Active TSS GM12878-XiMat blood
14 chr19:53425600-53427200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
15 chr19:53425600-53427200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr19:53425600-53427200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr19:53425600-53427200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
18 chr19:53425600-53427200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:53425600-53427400 Active TSS NHDF-Ad bronchial
20 chr19:53425600-53427800 Active TSS Rectal Smooth Muscle rectum
21 chr19:53425800-53426800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr19:53425800-53426800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
23 chr19:53425800-53426800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
24 chr19:53425800-53427000 Active TSS ES-I3 Cell Line embryonic stem cell
25 chr19:53425800-53427000 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr19:53425800-53427000 Active TSS HUES6 Cell Line embryonic stem cell
27 chr19:53425800-53427000 Active TSS iPS-20b Cell Line embryonic stem cell
28 chr19:53425800-53427000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
29 chr19:53425800-53427000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr19:53425800-53427000 Active TSS Primary T helper cells PMA-I stimulated --
31 chr19:53425800-53427000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr19:53425800-53427000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:53425800-53427000 Active TSS Brain Cingulate Gyrus brain
34 chr19:53425800-53427000 Active TSS HMEC breast
35 chr19:53425800-53427200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr19:53425800-53427200 Flanking Active TSS Primary B cells from cord blood blood
37 chr19:53425800-53427200 Flanking Active TSS Primary T cells fromperipheralblood blood
38 chr19:53425800-53427200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
39 chr19:53425800-53427200 Active TSS Brain Inferior Temporal Lobe brain
40 chr19:53425800-53427200 Active TSS Colonic Mucosa Colon
41 chr19:53425800-53427200 Active TSS Fetal Kidney kidney
42 chr19:53425800-53427200 Active TSS Pancreatic Islets Pancreatic Islet
43 chr19:53425800-53427200 Active TSS Hela-S3 cervix
44 chr19:53425800-53427200 Active TSS HepG2 liver
45 chr19:53425800-53427400 Active TSS Brain Anterior Caudate brain
46 chr19:53425800-53427600 Active TSS NHLF lung
47 chr19:53425800-53427800 Active TSS iPS-15b Cell Line embryonic stem cell
48 chr19:53425800-53427800 Flanking Active TSS Adipose Nuclei Adipose
49 chr19:53426000-53426800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr19:53426000-53426800 Active TSS Small Intestine intestine

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