Variant report

Variant rs1990268
Chromosome Location chr22:30777881-30777882
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30753200-30782200 Weak transcription Stomach Mucosa stomach
2 chr22:30753600-30779200 Weak transcription Left Ventricle heart
3 chr22:30753600-30779400 Weak transcription NHEK skin
4 chr22:30753600-30779600 Weak transcription NH-A brain
5 chr22:30753600-30782000 Weak transcription Colonic Mucosa Colon
6 chr22:30753600-30782000 Weak transcription Duodenum Mucosa Duodenum
7 chr22:30753600-30782200 Weak transcription Rectal Smooth Muscle rectum
8 chr22:30753600-30782400 Weak transcription Primary T cells from cord blood blood
9 chr22:30754200-30779200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr22:30754200-30782000 Weak transcription Fetal Brain Male brain
11 chr22:30759600-30782200 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr22:30762000-30782400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr22:30764000-30782200 Weak transcription Right Atrium heart
14 chr22:30766400-30782200 Weak transcription Fetal Kidney kidney
15 chr22:30767200-30779400 Weak transcription HSMM muscle
16 chr22:30767400-30779600 Weak transcription HSMMtube muscle
17 chr22:30768600-30781800 Strong transcription Fetal Stomach stomach
18 chr22:30769200-30782200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr22:30769200-30782200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr22:30769600-30780400 Strong transcription Fetal Brain Female brain
21 chr22:30770000-30779200 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr22:30770200-30781200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr22:30770400-30779600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr22:30770400-30780600 Strong transcription Fetal Intestine Small intestine
25 chr22:30770400-30780800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr22:30771200-30780400 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr22:30771200-30780600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr22:30771200-30780600 Strong transcription Brain Germinal Matrix brain
29 chr22:30771200-30781000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr22:30771400-30780800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr22:30771600-30780600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr22:30771600-30780800 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr22:30772000-30780800 Strong transcription Fetal Muscle Trunk muscle
34 chr22:30772000-30783000 Weak transcription Small Intestine intestine
35 chr22:30772200-30780800 Strong transcription Fetal Muscle Leg muscle
36 chr22:30772200-30782000 Weak transcription NHDF-Ad bronchial
37 chr22:30772600-30778000 Strong transcription Esophagus oesophagus
38 chr22:30772600-30780400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr22:30772600-30780400 Strong transcription Placenta Placenta
40 chr22:30772600-30780800 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr22:30772600-30780800 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr22:30772800-30778000 Strong transcription Muscle Satellite Cultured Cells --
43 chr22:30772800-30780200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr22:30772800-30780400 Strong transcription HUES48 Cell Line embryonic stem cell
45 chr22:30772800-30780400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr22:30773000-30778200 Strong transcription iPS-15b Cell Line embryonic stem cell
47 chr22:30773000-30779400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr22:30773000-30779800 Strong transcription Gastric stomach
49 chr22:30773000-30780200 Strong transcription Brain Cingulate Gyrus brain
50 chr22:30773000-30780400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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