Variant report

Variant	rs740084
Chromosome Location	chr22:30792914-30792915
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:87)
CpG islands
(count:61)
Chromatin interactive
region (count:6)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:87 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RCOR1	chr22:30792801-30793100	Hela-S3	cervix:	n/a	n/a
2	CHD2	chr22:30792736-30793105	H1-hESC	embryonic stem cell:	n/a	n/a
3	CHD2	chr22:30792756-30793608	Hela-S3	cervix:	n/a	n/a
4	SIN3A	chr22:30792746-30793198	H1-hESC	embryonic stem cell:	n/a	n/a
5	POLR2A	chr22:30792811-30793454	MCF-7	breast:	n/a	n/a
6	POLR2A	chr22:30792868-30793193	MCF-7	breast:	n/a	n/a
7	TAF1	chr22:30792807-30793099	SK-N-SH	brain:	n/a	n/a
8	POLR2A	chr22:30792819-30793136	HepG2	liver:	n/a	n/a
9	POLR2A	chr22:30792881-30793248	PANC-1	pancreas:	n/a	n/a
10	POLR2A	chr22:30792711-30793383	U87	brain:	n/a	n/a
11	MAZ	chr22:30792829-30793350	Hela-S3	cervix:	n/a	n/a
12	POLR2A	chr22:30792914-30793175	Hela-S3	cervix:	n/a	n/a
13	POLR2A	chr22:30792683-30793203	PFSK-1	brain:	n/a	n/a
14	TAF1	chr22:30792817-30793132	SK-N-SH	brain:	n/a	n/a
15	POLR2A	chr22:30792723-30793269	HUVEC	blood vessel:	n/a	n/a
16	POLR2A	chr22:30792802-30793220	HepG2	liver:	n/a	n/a
17	POLR2A	chr22:30792790-30793342	H1-neurons	neurons:	n/a	n/a
18	POLR2A	chr22:30792747-30793945	A549	lung:	n/a	n/a
19	CHD2	chr22:30792769-30793088	GM12878	blood:	n/a	n/a
20	POLR2A	chr22:30792901-30793143	HepG2	liver:	n/a	n/a
21	GABPA	chr22:30792798-30793770	H1-hESC	embryonic stem cell:	n/a	chr22:30793302-30793311 chr22:30793261-30793270
22	POLR2A	chr22:30792711-30793725	U87	brain:	n/a	n/a
23	POLR2A	chr22:30792907-30793211	GM12878	blood:	n/a	n/a
24	POLR2A	chr22:30791787-30796585	GM12878	blood:	n/a	n/a
25	POLR2A	chr22:30792829-30793212	U87	brain:	n/a	n/a
26	POLR2A	chr22:30792749-30793851	HepG2	liver:	n/a	n/a
27	CTCF	chr22:30792880-30793030	BJ	skin:	n/a	n/a
28	POLR2A	chr22:30792838-30793224	ECC-1	luminal epithelium:	n/a	n/a
29	MAX	chr22:30792678-30793542	ECC-1	luminal epithelium:	n/a	n/a
30	TAF1	chr22:30792749-30793286	ECC-1	luminal epithelium:	n/a	n/a
31	YY1	chr22:30792804-30793089	HCT-116	colon:	n/a	chr22:30792886-30792895
32	POLR2A	chr22:30792846-30793337	ProgFib	skin:	n/a	n/a
33	POLR2A	chr22:30792617-30795297	GM12878	blood:	n/a	n/a
34	POLR2A	chr22:30792819-30795221	Hela-S3	cervix:	n/a	n/a
35	MAX	chr22:30792606-30793239	ECC-1	luminal epithelium:	n/a	n/a
36	CTCF	chr22:30792900-30793050	SK-N-SH_RA	brain:	n/a	n/a
37	POLR2A	chr22:30792781-30793211	MCF10A-Er-Src	breast:	n/a	n/a
38	POLR2A	chr22:30792783-30793376	HUVEC	blood vessel:	n/a	n/a
39	POLR2A	chr22:30792827-30793277	HUVEC	blood vessel:	n/a	n/a
40	POLR2A	chr22:30792633-30793292	HCT-116	colon:	n/a	n/a
41	MAX	chr22:30792749-30793379	MCF-7	breast:	n/a	n/a
42	POLR2A	chr22:30792862-30793468	A549	lung:	n/a	n/a
43	MAX	chr22:30792739-30793239	SK-N-SH	brain:	n/a	n/a
44	POLR2A	chr22:30792744-30793223	SK-N-SH	brain:	n/a	n/a
45	SMC3	chr22:30792862-30793062	Hela-S3	cervix:	n/a	n/a
46	E2F4	chr22:30792880-30793080	MCF10A-Er-Src	breast:	n/a	n/a
47	JUND	chr22:30792819-30793012	H1-hESC	embryonic stem cell:	n/a	n/a
48	POLR2A	chr22:30792881-30793117	SK-N-SH	brain:	n/a	n/a
49	POLR2A	chr22:30792589-30793292	PBDE	blood:	n/a	n/a
50	POLR2A	chr22:30792722-30793223	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:30792888-30792938	HNPCEpiC	eye:	n/a
2	chr22:30792888-30792938	Caco-2	colon:	n/a
3	chr22:30792888-30792938	SK-N-MC	brain:	n/a
4	chr22:30792888-30792938	SKMC	muscle:	n/a
5	chr22:30792888-30792938	NHBE	bronchial:	n/a
6	chr22:30792888-30792938	HEK293	kidney:	embryo
7	chr22:30792888-30792938	Hepatocyte	liver:	n/a
8	chr22:30792888-30792938	ProgFib	skin:	n/a
9	chr22:30792888-30792938	U87	brain:	n/a
10	chr22:30792888-30792938	HepG2	liver:	n/a
11	chr22:30792888-30792938	HEEpiC	esophagus:	n/a
12	chr22:30792888-30792938	H1-hESC	embryonic stem cell:	embryo
13	chr22:30792888-30792938	RPTEC	kidney:	n/a
14	chr22:30792888-30792938	AG10803	skin:	n/a
15	chr22:30792888-30792938	GM12878	blood:	n/a
16	chr22:30792888-30792938	IMR90	lung:	fetal
17	chr22:30792888-30792938	MCF10A-Er-Src	breast:	n/a
18	chr22:30792888-30792938	GM19239	blood:	n/a
19	chr22:30792888-30792938	T-47D	breast:	n/a
20	chr22:30792888-30792938	HCM	heart:	n/a
21	chr22:30792888-30792938	Hela-S3	cervix:	n/a
22	chr22:30792888-30792938	HAEpiC	amniotic membrane:	n/a
23	chr22:30792888-30792938	SAEC	small airway:	n/a
24	chr22:30792888-30792938	AG09319	gingival:	n/a
25	chr22:30792888-30792938	LNCaP	prostate:	n/a
26	chr22:30792888-30792938	HRCEpiC	kidney:	n/a
27	chr22:30792888-30792938	SK-N-SH	brain:	n/a
28	chr22:30792888-30792938	BJ	skin:	n/a
29	chr22:30792888-30792938	AG04449	skin:	fetal
30	chr22:30792888-30792938	ECC-1	luminal epithelium:	n/a
31	chr22:30792888-30792938	HCT-116	colon:	n/a
32	chr22:30792888-30792938	MCF-7	breast:	n/a
33	chr22:30792888-30792938	NT2-D1	testis:	n/a
34	chr22:30792888-30792938	PANC-1	pancreas:	n/a
35	chr22:30792888-30792938	HL-60	blood:	n/a
36	chr22:30792888-30792938	Jurkat	blood:	n/a
37	chr22:30792888-30792938	HMEC	breast:	n/a
38	chr22:30792888-30792938	PrEC	prostate:	n/a
39	chr22:30792888-30792938	BE2_C	brain:	n/a
40	chr22:30792888-30792938	HIPEpiC	eye:	n/a
41	chr22:30792888-30792938	GM12892	blood:	n/a
42	chr22:30792888-30792938	GM06990	blood:	n/a
43	chr22:30792888-30792938	K562	blood:	n/a
44	chr22:30792888-30792938	HRPEpiC	eye:	n/a
45	chr22:30792888-30792938	HPAEpiC	pulmonary alveolar:	n/a
46	chr22:30792888-30792938	A549	lung:	n/a
47	chr22:30792888-30792938	AG09309	skin:	n/a
48	chr22:30792888-30792938	CMK	blood:	n/a
49	chr22:30792888-30792938	GM12891	blood:	n/a
50	chr22:30792888-30792938	SK-N-SH_RA	brain:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr22:30787731..30797808-chr22:30813672..30825727,31	MCF-7	breast:
2	chr22:30779604..30781335-chr22:30790630..30793179,2	MCF-7	breast:
3	chr17:56736502..56738510-chr22:30792727..30794981,2	MCF-7	breast:
4	chr22:30792578..30793211-chr6:111195646..111196460,2	HCT-116	colon:
5	chr22:30781850..30784098-chr22:30791520..30793035,3	MCF-7	breast:
6	chr22:30791754..30798377-chr22:30814746..30822334,13	K562	blood:

No data

Variant related genes	Relation type
SEC14L2	TF binding region
SEC14L2	CpG island
ENSG00000242114	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000273350	Chromatin interaction
ENSG00000123505	Chromatin interaction
ENSG00000222915	Chromatin interaction
ENSG00000268538	Chromatin interaction
ENSG00000099999	Chromatin interaction
ENSG00000272689	Chromatin interaction

Extended variants
information (count: 96 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:93)

rs_ID	r²[population]
rs1002189	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1076271	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1076295	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1076297	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1076298	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1076299	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1079227	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11705092	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11912350	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11913885	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13053375	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13053595	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13054303	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13055431	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13056326	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13057340	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13057861	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17656850	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17657174	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17657653	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17657701	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17658238	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17730485	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17730538	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17736937	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1990268	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2229807	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2240420	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2299825	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28360656	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs28360657	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34367123	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34995457	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35293738	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35537171	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35711436	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35782599	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4390846	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4820005	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4820006	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4820007	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4820835	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4820836	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4820838	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4820839	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4823089	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55979575	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs56300819	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs5749062	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5749063	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5749067	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5749075	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs5749076	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs5749077	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs5749080	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs5749081	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5749086	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5749087	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs5749088	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs5753058	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs5753060	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753061	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753069	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs5753070	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs5753073	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753078	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753082	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753095	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs5753096	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs5753097	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs5753101	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5753105	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5753106	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5753110	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs5753113	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs5753118	0.94[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs5753127	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs5763928	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs5763932	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs61322750	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62228968	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7287175	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7287908	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7288947	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs737750	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs737751	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs737813	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs737948	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs740220	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs740222	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs740223	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs757868	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8136826	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829171	chr22:30598030-31043578	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv914970	chr22:30619599-30850395	Active TSS Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
3	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs740084	RNF215	cis	Heart Left Ventricle	GTEx
rs740084	RP1-130H16.16	cis	lung	GTEx
rs740084	RP1-130H16.16	cis	Thyroid	GTEx

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:30783800-30793000	Weak transcription	Gastric	stomach
2	chr22:30789200-30793600	Weak transcription	K562	blood
3	chr22:30791800-30793000	Flanking Active TSS	HepG2	liver
4	chr22:30792000-30793000	Enhancers	Lung	lung
5	chr22:30792200-30793000	Flanking Active TSS	Dnd41	blood
6	chr22:30792400-30793000	Flanking Active TSS	Primary T cells from cord blood	blood
7	chr22:30792400-30793000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr22:30792400-30793000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
9	chr22:30792400-30793000	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
10	chr22:30792400-30793000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr22:30792400-30793000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr22:30792400-30793000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr22:30792400-30793000	Flanking Active TSS	Stomach Smooth Muscle	stomach
14	chr22:30792400-30793400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr22:30792400-30793400	Enhancers	Fetal Brain Male	brain
16	chr22:30792400-30793600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr22:30792400-30793800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr22:30792400-30794200	Active TSS	HSMM	muscle
19	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
20	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
21	chr22:30792600-30793000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
23	chr22:30792600-30793000	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr22:30792600-30793000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
25	chr22:30792600-30793000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
26	chr22:30792600-30793000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr22:30792600-30793000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr22:30792600-30793000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr22:30792600-30793000	Flanking Active TSS	Liver	Liver
30	chr22:30792600-30793000	Flanking Active TSS	Brain Hippocampus Middle	brain
31	chr22:30792600-30793000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
32	chr22:30792600-30793000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
33	chr22:30792600-30793000	Flanking Active TSS	Duodenum Mucosa	Duodenum
34	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
35	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
36	chr22:30792600-30793000	Flanking Active TSS	Ovary	ovary
37	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
38	chr22:30792600-30793000	Flanking Bivalent TSS/Enh	Skeletal Muscle Female	skeletal muscle
39	chr22:30792600-30793000	Flanking Active TSS	Thymus	Thymus
40	chr22:30792600-30793000	Flanking Active TSS	HMEC	breast
41	chr22:30792600-30793000	Flanking Active TSS	NH-A	brain
42	chr22:30792600-30793000	Flanking Active TSS	NHEK	skin
43	chr22:30792600-30793000	Flanking Active TSS	NHLF	lung
44	chr22:30792600-30793400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr22:30792600-30793400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr22:30792600-30793600	Active TSS	H9 Cell Line	embryonic stem cell
47	chr22:30792600-30793600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
48	chr22:30792600-30793600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
49	chr22:30792600-30793600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr22:30792600-30793600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links