Variant report

Variant rs5753058
Chromosome Location chr22:30683285-30683286
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30672600-30684400 Weak transcription Fetal Brain Female brain
2 chr22:30674400-30684000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr22:30674400-30684000 Weak transcription NHEK skin
4 chr22:30674400-30684200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr22:30674400-30684200 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr22:30674400-30684200 Weak transcription Brain Germinal Matrix brain
7 chr22:30674400-30684200 Weak transcription Right Atrium heart
8 chr22:30674600-30683800 Weak transcription Brain Cingulate Gyrus brain
9 chr22:30674600-30684000 Weak transcription Rectal Smooth Muscle rectum
10 chr22:30674600-30684200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr22:30674600-30684600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr22:30675400-30684000 Weak transcription Brain Anterior Caudate brain
13 chr22:30676000-30683800 Weak transcription Brain Substantia Nigra brain
14 chr22:30676000-30683800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr22:30676000-30684000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr22:30676000-30684000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr22:30676000-30684000 Weak transcription NHLF lung
18 chr22:30676200-30684000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr22:30677000-30684000 Weak transcription Osteobl bone
20 chr22:30678000-30683400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr22:30678200-30684200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr22:30678600-30684000 Weak transcription Primary B cells from cord blood blood
23 chr22:30678800-30684000 Weak transcription Thymus Thymus
24 chr22:30679200-30683400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr22:30679400-30683400 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr22:30679400-30684000 Weak transcription Muscle Satellite Cultured Cells --
27 chr22:30679600-30684000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr22:30679600-30684000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr22:30679600-30684200 Weak transcription HSMMtube muscle
30 chr22:30679600-30684200 Weak transcription NH-A brain
31 chr22:30679800-30683400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr22:30679800-30684200 Weak transcription HSMM muscle
33 chr22:30680000-30683600 Weak transcription Primary hematopoietic stem cells blood
34 chr22:30680200-30683400 Strong transcription Right Ventricle heart
35 chr22:30680800-30683400 Strong transcription Fetal Lung lung
36 chr22:30681000-30683600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr22:30681200-30683400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr22:30681400-30683400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr22:30681400-30683800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr22:30681400-30684000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr22:30681600-30683400 Weak transcription Liver Liver
42 chr22:30681600-30683800 Weak transcription Fetal Muscle Leg muscle
43 chr22:30681600-30684000 Weak transcription Primary T cells from cord blood blood
44 chr22:30681800-30683400 Genic enhancers Spleen Spleen
45 chr22:30681800-30684200 Weak transcription Left Ventricle heart
46 chr22:30682200-30683400 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr22:30682200-30683600 Genic enhancers A549 lung
48 chr22:30682200-30684000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr22:30682200-30684800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
50 chr22:30682400-30683400 Genic enhancers Breast Myoepithelial Primary Cells Breast

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