Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:45854327..45856053-chr11:45869325..45871424,2	K562	blood:
2	chr11:45845665..45849726-chr11:45853081..45856050,3	K562	blood:
3	chr11:45824552..45827544-chr11:45855388..45857462,2	MCF-7	breast:
4	chr11:45851162..45853664-chr11:45855593..45858334,2	K562	blood:

Variant related genes	Relation type
ENSG00000181830	Chromatin interaction

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10838521	0.87[ASN][1000 genomes]
rs11038677	0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2090602	0.92[ASN][1000 genomes]
rs2292912	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3824872	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4756034	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7108730	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7951225	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897314	chr11:45816020-45965129	Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45845800-45869000	Weak transcription	Right Atrium	heart
2	chr11:45846000-45855800	Weak transcription	Ovary	ovary
3	chr11:45848400-45855800	Weak transcription	Left Ventricle	heart
4	chr11:45851800-45855800	Weak transcription	Adipose Nuclei	Adipose
5	chr11:45853600-45856000	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr11:45854000-45856400	Enhancers	Placenta	Placenta
7	chr11:45854400-45856400	Flanking Active TSS	Dnd41	blood
8	chr11:45854600-45856400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr11:45854800-45856600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
10	chr11:45855200-45855800	Enhancers	K562	blood
11	chr11:45855200-45856000	Enhancers	Hela-S3	cervix
12	chr11:45855200-45856200	Enhancers	Primary T cells fromperipheralblood	blood
13	chr11:45855200-45856400	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr11:45855200-45856400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
15	chr11:45855200-45856400	Enhancers	Primary T helper naive cells from peripheral blood	blood
16	chr11:45855400-45856400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
17	chr11:45855400-45856400	Enhancers	Primary T helper cells PMA-I stimulated	--
18	chr11:45855400-45856400	Enhancers	Primary T helper cells fromperipheralblood	blood
19	chr11:45855400-45856400	Enhancers	Primary T killer memory cells from peripheral blood	blood
20	chr11:45855400-45856400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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