Variant report
Variant | rs201845 |
---|---|
Chromosome Location | chr11:32678357-32678358 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10488703 | 0.87[CEU][hapmap] |
rs10488704 | 0.87[CEU][hapmap];1.00[YRI][hapmap] |
rs10835981 | 0.87[CEU][hapmap];1.00[YRI][hapmap] |
rs11031936 | 0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11031964 | 0.94[CEU][hapmap];1.00[YRI][hapmap] |
rs201900 | 1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7108128 | 0.82[CEU][hapmap];1.00[YRI][hapmap] |
rs7483614 | 1.00[YRI][hapmap] |
rs9736849 | 0.82[AFR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv832109 | chr11:32661314-32830549 | Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
2 | nsv897189 | chr11:32677070-32751498 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |