Variant report

Variant rs2018908
Chromosome Location chr1:224923034-224923035
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224914800-224924400 Weak transcription Ovary ovary
2 chr1:224915000-224924400 Weak transcription Brain Anterior Caudate brain
3 chr1:224916200-224924200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr1:224918400-224924600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:224919000-224923200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:224919600-224926200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:224920200-224923400 Enhancers Fetal Thymus thymus
8 chr1:224920200-224924200 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr1:224920200-224925000 Weak transcription Colonic Mucosa Colon
10 chr1:224921000-224924200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:224921200-224924200 Weak transcription Spleen Spleen
12 chr1:224921400-224924200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:224921400-224924400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:224921400-224924400 Weak transcription NH-A brain
15 chr1:224921600-224923800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:224921600-224924200 Weak transcription Adipose Nuclei Adipose
17 chr1:224921600-224924400 Weak transcription Duodenum Mucosa Duodenum
18 chr1:224921600-224924600 Weak transcription Pancreas Pancrea
19 chr1:224921600-224931400 Weak transcription Psoas Muscle Psoas
20 chr1:224921800-224923600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:224921800-224923600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:224921800-224924200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:224921800-224924200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr1:224921800-224924200 Weak transcription Osteobl bone
25 chr1:224921800-224924400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:224921800-224924600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:224921800-224924600 Weak transcription Right Atrium heart
28 chr1:224921800-224925200 Weak transcription Esophagus oesophagus
29 chr1:224921800-224934600 Weak transcription HMEC breast
30 chr1:224922000-224924600 Weak transcription Right Ventricle heart
31 chr1:224922200-224923200 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr1:224922200-224923400 Enhancers Primary T cells from cord blood blood
33 chr1:224922200-224923600 Bivalent Enhancer Primary T cells fromperipheralblood blood
34 chr1:224922200-224923600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:224922200-224923800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:224922200-224923800 Enhancers GM12878-XiMat blood
37 chr1:224922400-224923200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr1:224922400-224923200 Enhancers Primary T helper cells PMA-I stimulated --
39 chr1:224922400-224923200 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr1:224922400-224923200 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr1:224922400-224924000 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:224922400-224924400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:224922400-224924400 Weak transcription Liver Liver
44 chr1:224922400-224924400 Weak transcription Left Ventricle heart
45 chr1:224922600-224923200 Enhancers Primary T helper cells fromperipheralblood blood
46 chr1:224922800-224924200 Weak transcription H1 Cell Line embryonic stem cell
47 chr1:224922800-224924200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:224922800-224924200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:224922800-224924200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:224922800-224924200 Weak transcription NHLF lung

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