Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1117487	0.81[ASN][1000 genomes]
rs1117490	0.81[ASN][1000 genomes]
rs11969573	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2021722	0.81[ASN][1000 genomes]
rs2253164	0.84[AFR][1000 genomes]
rs2284166	0.81[ASN][1000 genomes]
rs2428503	0.97[ASN][1000 genomes]
rs2517590	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2517608	0.81[ASN][1000 genomes]
rs2517610	0.81[ASN][1000 genomes]
rs2517611	0.92[ASN][1000 genomes]
rs2517614	0.97[ASN][1000 genomes]
rs2523713	0.81[ASN][1000 genomes]
rs2523714	0.81[ASN][1000 genomes]
rs2523721	0.85[ASN][1000 genomes]
rs2523722	0.97[ASN][1000 genomes]
rs2523741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28360014	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2844776	0.81[ASN][1000 genomes]
rs2844784	0.94[ASN][1000 genomes]
rs55957413	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59975149	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61154150	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73426382	0.86[ASN][1000 genomes]
rs885912	0.81[ASN][1000 genomes]
rs971570	0.81[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2023475	HCG18	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30205600-30213000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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