Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:30187236..30189646-chr6:30189831..30192507,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1117487	0.81[ASN][1000 genomes]
rs1117490	0.81[ASN][1000 genomes]
rs11969573	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2021722	0.81[ASN][1000 genomes]
rs2023475	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2284166	0.81[ASN][1000 genomes]
rs2428503	0.97[ASN][1000 genomes]
rs2517590	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2517608	0.81[ASN][1000 genomes]
rs2517610	0.81[ASN][1000 genomes]
rs2517611	0.92[ASN][1000 genomes]
rs2517614	0.97[ASN][1000 genomes]
rs2523713	0.81[ASN][1000 genomes]
rs2523714	0.81[ASN][1000 genomes]
rs2523721	0.85[ASN][1000 genomes]
rs2523722	0.97[ASN][1000 genomes]
rs2523741	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28360014	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2844776	0.81[ASN][1000 genomes]
rs2844784	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55957413	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61154150	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73426382	0.86[ASN][1000 genomes]
rs885912	0.81[ASN][1000 genomes]
rs971570	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv884058	chr6:30182395-30202429	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30185400-30190400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr6:30187400-30191200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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