Variant report

Variant rs2040168
Chromosome Location chr22:22080402-22080403
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22053600-22088800 Weak transcription Aorta Aorta
2 chr22:22056000-22080800 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr22:22057800-22088400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr22:22064800-22087400 Weak transcription Fetal Intestine Small intestine
5 chr22:22065000-22088400 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr22:22065200-22088800 Weak transcription Spleen Spleen
7 chr22:22065600-22080800 Weak transcription Primary T cells from cord blood blood
8 chr22:22067800-22088400 Weak transcription Primary hematopoietic stem cells blood
9 chr22:22068000-22081000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr22:22068000-22081000 Weak transcription Brain Anterior Caudate brain
11 chr22:22068000-22088400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr22:22068000-22088800 Weak transcription Fetal Lung lung
13 chr22:22068600-22082400 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr22:22068800-22082000 Weak transcription Fetal Brain Female brain
15 chr22:22068800-22082800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr22:22069000-22088400 Weak transcription Stomach Smooth Muscle stomach
17 chr22:22069200-22080800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr22:22069200-22088800 Weak transcription HSMMtube muscle
19 chr22:22069400-22080800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr22:22069400-22080800 Weak transcription Dnd41 blood
21 chr22:22069400-22081000 Weak transcription Brain Germinal Matrix brain
22 chr22:22071000-22080800 Weak transcription Fetal Muscle Leg muscle
23 chr22:22073600-22082200 Weak transcription Lung lung
24 chr22:22073600-22088800 Weak transcription Gastric stomach
25 chr22:22074000-22081000 Weak transcription Brain Hippocampus Middle brain
26 chr22:22074000-22085800 Weak transcription Primary B cells from cord blood blood
27 chr22:22076400-22088800 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr22:22077000-22081400 Strong transcription Right Atrium heart
29 chr22:22077200-22085000 Weak transcription Ovary ovary
30 chr22:22077200-22088800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr22:22077400-22080600 Weak transcription Fetal Thymus thymus
32 chr22:22078600-22080600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr22:22078600-22080800 Weak transcription Fetal Stomach stomach
34 chr22:22078800-22080600 Weak transcription Primary B cells from peripheral blood blood
35 chr22:22078800-22080600 Weak transcription GM12878-XiMat blood
36 chr22:22078800-22080800 Weak transcription Fetal Muscle Trunk muscle
37 chr22:22080000-22081200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr22:22080000-22081600 Enhancers Primary T cells fromperipheralblood blood
39 chr22:22080000-22081800 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr22:22080200-22081400 Enhancers Primary mononuclear cells fromperipheralblood Blood
41 chr22:22080200-22081400 Enhancers Fetal Heart heart
42 chr22:22080200-22081600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
43 chr22:22080400-22081200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr22:22080400-22081600 Enhancers H1 Cell Line embryonic stem cell
45 chr22:22080400-22081600 Enhancers Thymus Thymus
46 chr22:22080400-22082000 Enhancers Skeletal Muscle Female skeletal muscle

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