Variant report

Variant rs5749939
Chromosome Location chr22:22141825-22141826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22110600-22150600 Weak transcription Fetal Heart heart
2 chr22:22113400-22163800 Weak transcription Right Atrium heart
3 chr22:22114200-22172800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr22:22121600-22171400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr22:22123200-22162200 Strong transcription Fetal Thymus thymus
6 chr22:22127200-22142400 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr22:22127200-22145200 Weak transcription Small Intestine intestine
8 chr22:22127200-22146000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr22:22127200-22167600 Weak transcription Psoas Muscle Psoas
10 chr22:22127200-22170600 Weak transcription Hela-S3 cervix
11 chr22:22127400-22145800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr22:22127400-22146000 Weak transcription A549 lung
13 chr22:22129000-22162200 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr22:22129600-22151200 Weak transcription Colon Smooth Muscle Colon
15 chr22:22129800-22142400 Weak transcription Rectal Smooth Muscle rectum
16 chr22:22129800-22152000 Weak transcription Brain Germinal Matrix brain
17 chr22:22130000-22150600 Weak transcription Ovary ovary
18 chr22:22130000-22150800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr22:22130400-22147000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr22:22130600-22143600 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr22:22131400-22150600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr22:22132000-22152000 Weak transcription Right Ventricle heart
23 chr22:22133400-22156000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr22:22134200-22162200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr22:22134400-22142400 Strong transcription Fetal Stomach stomach
26 chr22:22134600-22151200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr22:22135000-22142400 Weak transcription Brain Cingulate Gyrus brain
28 chr22:22135000-22146400 Strong transcription Fetal Adrenal Gland Adrenal Gland
29 chr22:22135200-22152400 Strong transcription Fetal Muscle Trunk muscle
30 chr22:22135200-22162200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr22:22135800-22162400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr22:22135800-22162600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr22:22135800-22162600 Strong transcription Primary monocytes fromperipheralblood blood
34 chr22:22136000-22143200 Strong transcription Adipose Nuclei Adipose
35 chr22:22136000-22143200 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr22:22136000-22162400 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr22:22136200-22143200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr22:22136200-22143400 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr22:22136200-22143800 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr22:22136200-22161800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr22:22136600-22146400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr22:22137600-22143400 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr22:22137600-22148200 Strong transcription HUES48 Cell Line embryonic stem cell
44 chr22:22137600-22152400 Weak transcription Esophagus oesophagus
45 chr22:22137600-22162600 Strong transcription Dnd41 blood
46 chr22:22138000-22150800 Weak transcription Gastric stomach
47 chr22:22138200-22142200 Weak transcription Fetal Lung lung
48 chr22:22138200-22143200 Strong transcription Primary B cells from peripheral blood blood
49 chr22:22138400-22152000 Weak transcription Spleen Spleen
50 chr22:22138800-22149400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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