The 2.0 version of rSNPBase

Variant report

Variant rs205097
Chromosome Location chr17:19682206-19682207
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19666000-19691200 Weak transcription Spleen Spleen
2 chr17:19666000-19691800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr17:19670200-19694200 Weak transcription Right Ventricle heart
4 chr17:19670200-19699400 Weak transcription Psoas Muscle Psoas
5 chr17:19670400-19683800 Weak transcription Fetal Brain Male brain
6 chr17:19673800-19685000 Weak transcription HSMM muscle
7 chr17:19673800-19769800 Weak transcription NH-A brain
8 chr17:19674000-19699200 Strong transcription Primary monocytes fromperipheralblood blood
9 chr17:19674000-19699200 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr17:19675000-19683800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr17:19675200-19693000 Weak transcription Small Intestine intestine
12 chr17:19675200-19695600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr17:19675400-19688200 Strong transcription Fetal Muscle Trunk muscle
14 chr17:19675600-19683000 Weak transcription Placenta Amnion Placenta Amnion
15 chr17:19675600-19684600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr17:19675600-19691200 Weak transcription Esophagus oesophagus
17 chr17:19675600-19693600 Strong transcription Fetal Muscle Leg muscle
18 chr17:19676000-19691200 Weak transcription Fetal Thymus thymus
19 chr17:19676400-19685400 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr17:19676400-19688000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr17:19676400-19688400 Strong transcription Fetal Intestine Large intestine
22 chr17:19676800-19683400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr17:19676800-19683400 Strong transcription Fetal Lung lung
24 chr17:19676800-19691800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr17:19676800-19697000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr17:19676800-19699400 Weak transcription Thymus Thymus
27 chr17:19677000-19685800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr17:19677000-19687800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr17:19677000-19688000 Strong transcription Adipose Nuclei Adipose
30 chr17:19677200-19685000 Strong transcription Liver Liver
31 chr17:19677200-19685200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr17:19677200-19685800 Strong transcription Brain Cingulate Gyrus brain
33 chr17:19677200-19691600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr17:19677400-19687800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr17:19677400-19696200 Weak transcription Fetal Heart heart
36 chr17:19677600-19696200 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr17:19677800-19700000 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr17:19678000-19698400 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr17:19678200-19683200 Strong transcription Stomach Smooth Muscle stomach
40 chr17:19678200-19685800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr17:19678200-19687200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr17:19678200-19687400 Strong transcription Placenta Placenta
43 chr17:19678200-19688000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:19678200-19691200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr17:19678200-19698800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr17:19678200-19712000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr17:19678400-19683400 Strong transcription Duodenum Mucosa Duodenum
48 chr17:19678400-19686000 Strong transcription Osteobl bone
49 chr17:19678400-19687200 Strong transcription Muscle Satellite Cultured Cells --
50 chr17:19678400-19692000 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015