The 2.0 version of rSNPBase

Variant report

Variant rs3101812
Chromosome Location chr17:19765688-19765689
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19673800-19769800 Weak transcription NH-A brain
2 chr17:19700400-19768400 Weak transcription Fetal Heart heart
3 chr17:19700800-19769800 Weak transcription HSMMtube muscle
4 chr17:19701000-19766200 Weak transcription Primary B cells from cord blood blood
5 chr17:19701000-19770000 Weak transcription Colonic Mucosa Colon
6 chr17:19703800-19769800 Weak transcription Psoas Muscle Psoas
7 chr17:19704400-19770000 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr17:19706800-19769800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr17:19712400-19769800 Weak transcription Muscle Satellite Cultured Cells --
10 chr17:19725400-19768600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr17:19727400-19768800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr17:19727800-19769800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr17:19728000-19770000 Weak transcription Esophagus oesophagus
14 chr17:19728200-19769800 Weak transcription HSMM muscle
15 chr17:19728200-19770000 Weak transcription Pancreas Pancrea
16 chr17:19728400-19768800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr17:19728600-19769800 Weak transcription Rectal Smooth Muscle rectum
18 chr17:19728800-19769400 Weak transcription NHEK skin
19 chr17:19737600-19769800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:19738200-19767400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr17:19741400-19768600 Weak transcription Brain Hippocampus Middle brain
22 chr17:19742800-19769800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr17:19744000-19769800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr17:19744200-19770200 Weak transcription Gastric stomach
25 chr17:19745400-19769200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr17:19747000-19769800 Weak transcription NHDF-Ad bronchial
27 chr17:19747200-19769400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr17:19749600-19770000 Weak transcription Right Ventricle heart
29 chr17:19750000-19770000 Weak transcription Left Ventricle heart
30 chr17:19750200-19766600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr17:19750200-19768400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr17:19750200-19768400 Weak transcription Fetal Brain Male brain
33 chr17:19750200-19768600 Weak transcription Brain Cingulate Gyrus brain
34 chr17:19750200-19769200 Weak transcription Brain Substantia Nigra brain
35 chr17:19750200-19769800 Weak transcription Duodenum Mucosa Duodenum
36 chr17:19750200-19770000 Weak transcription Aorta Aorta
37 chr17:19750400-19768400 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr17:19750400-19768600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr17:19750400-19769600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr17:19750400-19769800 Weak transcription Liver Liver
41 chr17:19750400-19769800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr17:19750800-19768600 Weak transcription Colon Smooth Muscle Colon
43 chr17:19750800-19769600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr17:19750800-19770200 Weak transcription Spleen Spleen
45 chr17:19751400-19769800 Weak transcription Osteobl bone
46 chr17:19751600-19769800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr17:19751800-19766200 Weak transcription Brain Anterior Caudate brain
48 chr17:19752200-19768400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr17:19752800-19766200 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr17:19752800-19766200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015