Variant report

Variant rs157388
Chromosome Location chr17:19701686-19701687
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19673800-19769800 Weak transcription NH-A brain
2 chr17:19678200-19712000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:19680000-19726800 Weak transcription NHLF lung
4 chr17:19690200-19709000 Strong transcription Adipose Nuclei Adipose
5 chr17:19690800-19707600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr17:19691000-19705200 Strong transcription Duodenum Smooth Muscle Duodenum
7 chr17:19691800-19702000 Strong transcription Brain Hippocampus Middle brain
8 chr17:19693000-19702000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr17:19695400-19702000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr17:19695600-19701800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr17:19695600-19701800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr17:19695600-19701800 Strong transcription Stomach Smooth Muscle stomach
13 chr17:19695600-19702000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr17:19695800-19702000 Strong transcription Brain Inferior Temporal Lobe brain
15 chr17:19696000-19702000 Strong transcription Primary T cells fromperipheralblood blood
16 chr17:19696200-19704200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr17:19696200-19707600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr17:19696400-19702000 ZNF genes & repeats Primary hematopoietic stem cells blood
19 chr17:19696400-19702000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr17:19696600-19702000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
21 chr17:19696600-19702000 Strong transcription Brain Cingulate Gyrus brain
22 chr17:19696600-19702200 Strong transcription Primary T killer naive cells fromperipheralblood blood
23 chr17:19696600-19705200 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr17:19696800-19703400 Strong transcription Osteobl bone
25 chr17:19696800-19708600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr17:19697000-19701800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr17:19697000-19704400 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr17:19697400-19702200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr17:19698000-19707400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr17:19698000-19709400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr17:19698200-19701800 ZNF genes & repeats Brain Germinal Matrix brain
32 chr17:19698200-19701800 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr17:19698600-19701800 Strong transcription Fetal Brain Male brain
34 chr17:19698800-19701800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
35 chr17:19698800-19701800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr17:19699000-19704800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr17:19699200-19701800 ZNF genes & repeats Fetal Intestine Small intestine
38 chr17:19699400-19701800 Strong transcription Colon Smooth Muscle Colon
39 chr17:19699400-19701800 ZNF genes & repeats Ovary ovary
40 chr17:19700200-19701800 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr17:19700200-19701800 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr17:19700200-19703400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr17:19700200-19704400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr17:19700200-19722600 Weak transcription Esophagus oesophagus
45 chr17:19700200-19727000 Weak transcription Right Ventricle heart
46 chr17:19700400-19701800 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr17:19700400-19703000 Weak transcription HMEC breast
48 chr17:19700400-19703800 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr17:19700400-19705200 Strong transcription Brain Anterior Caudate brain
50 chr17:19700400-19705200 Strong transcription Fetal Muscle Trunk muscle

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