The 2.0 version of rSNPBase

Variant report

Variant rs281330
Chromosome Location chr17:19759673-19759674
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19673800-19769800 Weak transcription NH-A brain
2 chr17:19700400-19768400 Weak transcription Fetal Heart heart
3 chr17:19700800-19769800 Weak transcription HSMMtube muscle
4 chr17:19701000-19766200 Weak transcription Primary B cells from cord blood blood
5 chr17:19701000-19770000 Weak transcription Colonic Mucosa Colon
6 chr17:19703800-19769800 Weak transcription Psoas Muscle Psoas
7 chr17:19704400-19770000 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr17:19706800-19769800 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr17:19712400-19769800 Weak transcription Muscle Satellite Cultured Cells --
10 chr17:19725400-19768600 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr17:19727400-19768800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr17:19727800-19769800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr17:19728000-19770000 Weak transcription Esophagus oesophagus
14 chr17:19728200-19769800 Weak transcription HSMM muscle
15 chr17:19728200-19770000 Weak transcription Pancreas Pancrea
16 chr17:19728400-19768800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr17:19728600-19769800 Weak transcription Rectal Smooth Muscle rectum
18 chr17:19728800-19769400 Weak transcription NHEK skin
19 chr17:19734000-19762800 Weak transcription HMEC breast
20 chr17:19737600-19769800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr17:19738200-19767400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr17:19741400-19768600 Weak transcription Brain Hippocampus Middle brain
23 chr17:19742800-19769800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr17:19744000-19769800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr17:19744200-19770200 Weak transcription Gastric stomach
26 chr17:19745400-19769200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr17:19746600-19761600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr17:19746600-19762600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr17:19746600-19764800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr17:19746600-19765000 Weak transcription A549 lung
31 chr17:19747000-19769800 Weak transcription NHDF-Ad bronchial
32 chr17:19747200-19769400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr17:19748800-19763000 Weak transcription Fetal Kidney kidney
34 chr17:19749200-19763000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr17:19749600-19763000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr17:19749600-19770000 Weak transcription Right Ventricle heart
37 chr17:19749800-19762800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr17:19749800-19762800 Weak transcription Primary T cells fromperipheralblood blood
39 chr17:19750000-19770000 Weak transcription Left Ventricle heart
40 chr17:19750200-19762600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr17:19750200-19762800 Weak transcription Placenta Amnion Placenta Amnion
42 chr17:19750200-19763000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr17:19750200-19766600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr17:19750200-19768400 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr17:19750200-19768400 Weak transcription Fetal Brain Male brain
46 chr17:19750200-19768600 Weak transcription Brain Cingulate Gyrus brain
47 chr17:19750200-19769200 Weak transcription Brain Substantia Nigra brain
48 chr17:19750200-19769800 Weak transcription Duodenum Mucosa Duodenum
49 chr17:19750200-19770000 Weak transcription Aorta Aorta
50 chr17:19750400-19762800 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015