Variant report

Variant rs123081
Chromosome Location chr17:19725553-19725554
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19673800-19769800 Weak transcription NH-A brain
2 chr17:19680000-19726800 Weak transcription NHLF lung
3 chr17:19700200-19727000 Weak transcription Right Ventricle heart
4 chr17:19700400-19745200 Weak transcription Stomach Mucosa stomach
5 chr17:19700400-19768400 Weak transcription Fetal Heart heart
6 chr17:19700800-19769800 Weak transcription HSMMtube muscle
7 chr17:19701000-19726600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr17:19701000-19726800 Weak transcription Rectal Smooth Muscle rectum
9 chr17:19701000-19727000 Weak transcription Thymus Thymus
10 chr17:19701000-19728000 Weak transcription HUVEC blood vessel
11 chr17:19701000-19728200 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr17:19701000-19732400 Strong transcription Primary monocytes fromperipheralblood blood
13 chr17:19701000-19743200 Weak transcription Gastric stomach
14 chr17:19701000-19743400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr17:19701000-19748600 Weak transcription Spleen Spleen
16 chr17:19701000-19753400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr17:19701000-19766200 Weak transcription Primary B cells from cord blood blood
18 chr17:19701000-19770000 Weak transcription Colonic Mucosa Colon
19 chr17:19701200-19758400 Weak transcription Small Intestine intestine
20 chr17:19701400-19726800 Weak transcription HSMM muscle
21 chr17:19701800-19742800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr17:19703800-19727000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr17:19703800-19769800 Weak transcription Psoas Muscle Psoas
24 chr17:19704200-19726000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr17:19704400-19726400 Weak transcription Fetal Thymus thymus
26 chr17:19704400-19754800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr17:19704400-19770000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr17:19705200-19726400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr17:19705200-19726600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr17:19705200-19733200 Weak transcription HMEC breast
31 chr17:19706800-19769800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr17:19707400-19726800 Weak transcription Duodenum Mucosa Duodenum
33 chr17:19709200-19726600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr17:19710000-19729000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr17:19711200-19726800 Weak transcription NHEK skin
36 chr17:19712400-19726400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr17:19712400-19730000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr17:19712400-19769800 Weak transcription Muscle Satellite Cultured Cells --
39 chr17:19712600-19726400 Weak transcription A549 lung
40 chr17:19712600-19726600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr17:19712600-19726600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr17:19712600-19726600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr17:19712600-19726800 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr17:19712600-19742400 Weak transcription Fetal Kidney kidney
45 chr17:19712600-19748400 Weak transcription Fetal Brain Male brain
46 chr17:19713000-19726600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr17:19714000-19726600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr17:19715400-19729200 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr17:19716400-19737000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr17:19716600-19726800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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