The 2.0 version of rSNPBase

Variant report

Variant rs205087
Chromosome Location chr17:19689975-19689976
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19666000-19691200 Weak transcription Spleen Spleen
2 chr17:19666000-19691800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr17:19670200-19694200 Weak transcription Right Ventricle heart
4 chr17:19670200-19699400 Weak transcription Psoas Muscle Psoas
5 chr17:19673800-19769800 Weak transcription NH-A brain
6 chr17:19674000-19699200 Strong transcription Primary monocytes fromperipheralblood blood
7 chr17:19674000-19699200 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr17:19675200-19693000 Weak transcription Small Intestine intestine
9 chr17:19675200-19695600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr17:19675600-19691200 Weak transcription Esophagus oesophagus
11 chr17:19675600-19693600 Strong transcription Fetal Muscle Leg muscle
12 chr17:19676000-19691200 Weak transcription Fetal Thymus thymus
13 chr17:19676800-19691800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr17:19676800-19697000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr17:19676800-19699400 Weak transcription Thymus Thymus
16 chr17:19677200-19691600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr17:19677400-19696200 Weak transcription Fetal Heart heart
18 chr17:19677600-19696200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr17:19677800-19700000 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr17:19678000-19698400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr17:19678200-19691200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr17:19678200-19698800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr17:19678200-19712000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr17:19678400-19692000 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr17:19678800-19691800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr17:19678800-19698800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr17:19678800-19699200 Weak transcription Colonic Mucosa Colon
28 chr17:19679200-19696400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr17:19679200-19699400 Strong transcription Fetal Stomach stomach
30 chr17:19679600-19700000 Weak transcription HMEC breast
31 chr17:19679600-19701000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr17:19679800-19691200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr17:19680000-19697200 Weak transcription Rectal Smooth Muscle rectum
34 chr17:19680000-19726800 Weak transcription NHLF lung
35 chr17:19680600-19696600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr17:19680600-19698800 Weak transcription HUVEC blood vessel
37 chr17:19680800-19691200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr17:19681600-19690600 Weak transcription Left Ventricle heart
39 chr17:19681600-19691400 Weak transcription Brain Angular Gyrus brain
40 chr17:19681800-19691200 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr17:19682200-19691200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr17:19682200-19699400 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr17:19682400-19690600 Weak transcription Primary B cells from cord blood blood
44 chr17:19682400-19699400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr17:19683400-19691200 Weak transcription Duodenum Mucosa Duodenum
46 chr17:19684000-19696800 Weak transcription Primary B cells from peripheral blood blood
47 chr17:19684200-19690800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr17:19684600-19693800 Weak transcription Fetal Brain Male brain
49 chr17:19685200-19695600 Weak transcription NHDF-Ad bronchial
50 chr17:19685400-19690400 Weak transcription Lung lung

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Last update: Aug 31, 2015