Variant report

Variant rs281339
Chromosome Location chr17:19771350-19771351
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19768600-19771400 Active TSS GM12878-XiMat blood
2 chr17:19769000-19771800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr17:19769200-19771400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr17:19769400-19771400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr17:19769400-19771400 Active TSS Brain Anterior Caudate brain
6 chr17:19769400-19771800 Active TSS A549 lung
7 chr17:19769600-19771800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr17:19769800-19771400 Active TSS ES-I3 Cell Line embryonic stem cell
9 chr17:19769800-19771400 Active TSS H1 Cell Line embryonic stem cell
10 chr17:19769800-19771400 Active TSS HUES48 Cell Line embryonic stem cell
11 chr17:19769800-19771400 Active TSS HUES6 Cell Line embryonic stem cell
12 chr17:19769800-19771600 Active TSS ES-WA7 Cell Line embryonic stem cell
13 chr17:19769800-19771600 Active TSS H9 Cell Line embryonic stem cell
14 chr17:19769800-19771600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr17:19769800-19771600 Active TSS Muscle Satellite Cultured Cells --
16 chr17:19769800-19771600 Active TSS Brain Inferior Temporal Lobe brain
17 chr17:19769800-19771600 Active TSS Fetal Intestine Large intestine
18 chr17:19769800-19771600 Active TSS Fetal Stomach stomach
19 chr17:19769800-19771800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
20 chr17:19769800-19771800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr17:19769800-19771800 Active TSS Pancreatic Islets Pancreatic Islet
22 chr17:19769800-19771800 Active TSS Ovary ovary
23 chr17:19769800-19771800 Active TSS Psoas Muscle Psoas
24 chr17:19769800-19771800 Active TSS Right Atrium heart
25 chr17:19769800-19771800 Active TSS HSMM muscle
26 chr17:19769800-19771800 Active TSS NHDF-Ad bronchial
27 chr17:19769800-19772000 Active TSS Brain Cingulate Gyrus brain
28 chr17:19769800-19772000 Active TSS Duodenum Smooth Muscle Duodenum
29 chr17:19769800-19772200 Active TSS Fetal Kidney kidney
30 chr17:19769800-19772200 Active TSS Fetal Lung lung
31 chr17:19770000-19771400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr17:19770000-19771400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr17:19770000-19771400 Active TSS iPS-15b Cell Line embryonic stem cell
34 chr17:19770000-19771400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
35 chr17:19770000-19771400 Active TSS Esophagus oesophagus
36 chr17:19770000-19771400 Active TSS Pancreas Pancrea
37 chr17:19770000-19771600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr17:19770000-19771600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr17:19770000-19771600 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr17:19770000-19771600 Active TSS Aorta Aorta
41 chr17:19770000-19771600 Active TSS Brain Angular Gyrus brain
42 chr17:19770000-19771600 Active TSS Left Ventricle heart
43 chr17:19770000-19771600 Active TSS Skeletal Muscle Female skeletal muscle
44 chr17:19770000-19771800 Active TSS Placenta Amnion Placenta Amnion
45 chr17:19770000-19771800 Active TSS Stomach Mucosa stomach
46 chr17:19770200-19771400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr17:19770200-19771400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr17:19770200-19771400 Active TSS iPS-18 Cell Line embryonic stem cell
49 chr17:19770200-19771400 Active TSS iPS-20b Cell Line embryonic stem cell
50 chr17:19770200-19771400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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