Variant report
Variant | rs2066 |
---|---|
Chromosome Location | chr4:9824874-9824875 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10000582 | 0.90[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs10002519 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10004947 | 0.88[EUR][1000 genomes] |
rs10009657 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10022660 | 1.00[CEU][hapmap];0.90[CHB][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10025644 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10025968 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs10032756 | 1.00[CEU][hapmap];0.88[CHB][hapmap];0.89[EUR][1000 genomes] |
rs1114199 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11930077 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11930098 | 0.89[EUR][1000 genomes] |
rs11931553 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs11932607 | 0.89[EUR][1000 genomes] |
rs11933731 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs11933838 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs11934050 | 0.89[EUR][1000 genomes] |
rs11938128 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11938866 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs11941148 | 0.88[CEU][hapmap];0.89[EUR][1000 genomes] |
rs11946054 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs11947634 | 0.89[EUR][1000 genomes] |
rs12642114 | 0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12643296 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12643688 | 0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12643735 | 0.93[ASN][1000 genomes] |
rs12644471 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12647249 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs16889496 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs16889509 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs16889519 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs16890728 | 0.89[CEU][hapmap] |
rs2292916 | 0.89[EUR][1000 genomes] |
rs28392795 | 0.89[EUR][1000 genomes] |
rs28429694 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs28504140 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs28735365 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs28831091 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs3775950 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs55653516 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs55670339 | 0.88[EUR][1000 genomes] |
rs55721900 | 0.88[EUR][1000 genomes] |
rs55858763 | 0.89[EUR][1000 genomes] |
rs55864719 | 0.89[EUR][1000 genomes] |
rs56014085 | 0.89[EUR][1000 genomes] |
rs56136402 | 0.89[EUR][1000 genomes] |
rs56202030 | 0.88[EUR][1000 genomes] |
rs56253435 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs56275585 | 0.89[EUR][1000 genomes] |
rs56288911 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs56322912 | 0.88[EUR][1000 genomes] |
rs56351177 | 0.89[EUR][1000 genomes] |
rs56358669 | 0.88[EUR][1000 genomes] |
rs56396145 | 0.89[EUR][1000 genomes] |
rs56399359 | 0.88[EUR][1000 genomes] |
rs59574200 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs60715294 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs61338451 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs62293270 | 0.89[EUR][1000 genomes] |
rs62293272 | 0.89[EUR][1000 genomes] |
rs62293275 | 0.88[EUR][1000 genomes] |
rs62293276 | 0.81[EUR][1000 genomes] |
rs62293282 | 0.88[EUR][1000 genomes] |
rs62293283 | 0.88[EUR][1000 genomes] |
rs62293284 | 0.88[EUR][1000 genomes] |
rs62293285 | 0.88[EUR][1000 genomes] |
rs62293286 | 0.88[EUR][1000 genomes] |
rs62293287 | 0.88[EUR][1000 genomes] |
rs62293289 | 0.88[EUR][1000 genomes] |
rs62293290 | 0.88[EUR][1000 genomes] |
rs62293291 | 0.88[EUR][1000 genomes] |
rs62293295 | 0.88[EUR][1000 genomes] |
rs62293296 | 0.87[EUR][1000 genomes] |
rs62293297 | 0.88[EUR][1000 genomes] |
rs62293298 | 0.88[EUR][1000 genomes] |
rs62293301 | 0.87[EUR][1000 genomes] |
rs62295669 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62295689 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs62295694 | 0.89[EUR][1000 genomes] |
rs62295695 | 0.89[EUR][1000 genomes] |
rs62295697 | 0.89[EUR][1000 genomes] |
rs6449009 | 0.97[EUR][1000 genomes] |
rs6449011 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449026 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449043 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449044 | 0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449045 | 0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449049 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6449051 | 0.91[CEU][hapmap];0.88[CHB][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6449052 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs6817564 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6834978 | 1.00[CEU][hapmap];0.88[EUR][1000 genomes] |
rs6837273 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6838850 | 1.00[CEU][hapmap];0.88[EUR][1000 genomes] |
rs6844216 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6856012 | 0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs73223785 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs73223786 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs73225810 | 0.89[EUR][1000 genomes] |
rs73225811 | 0.88[EUR][1000 genomes] |
rs73225812 | 0.87[EUR][1000 genomes] |
rs73225831 | 0.88[EUR][1000 genomes] |
rs7663670 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7665666 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7677964 | 0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7680554 | 0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7687896 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7688629 | 0.86[EUR][1000 genomes] |
rs7695879 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs950309 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs9684002 | 0.89[EUR][1000 genomes] |
rs9990770 | 1.00[CEU][hapmap];0.90[EUR][1000 genomes] |
rs9992815 | 1.00[CEU][hapmap];0.90[EUR][1000 genomes] |
rs9996229 | 0.89[EUR][1000 genomes] |
rs9996799 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv533218 | chr4:9371016-10252290 | Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 74 gene(s) | inside rSNPs | diseases |
2 | nsv530090 | chr4:9383695-10165033 | Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 70 gene(s) | inside rSNPs | diseases |
3 | nsv998043 | chr4:9496282-9830208 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 18 gene(s) | inside rSNPs | diseases |
4 | nsv878667 | chr4:9543673-9903121 | ZNF genes & repeats Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 16 gene(s) | inside rSNPs | diseases |
5 | nsv1014216 | chr4:9713612-10223836 | Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 53 gene(s) | inside rSNPs | diseases |
6 | nsv1010249 | chr4:9716101-10086188 | Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 15 gene(s) | inside rSNPs | diseases |
7 | nsv878671 | chr4:9766888-9912101 | Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
8 | nsv878672 | chr4:9786732-10008305 | Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
9 | nsv878673 | chr4:9794724-9834107 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
10 | nsv878674 | chr4:9797703-9900314 | Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
11 | nsv878675 | chr4:9797703-9915741 | Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
12 | nsv878676 | chr4:9797703-9978094 | Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
13 | nsv878677 | chr4:9797703-10008305 | Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
14 | nsv1007593 | chr4:9802146-9956285 | Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
15 | nsv878678 | chr4:9802853-9850220 | Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
16 | nsv878679 | chr4:9802853-9859897 | Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer | TF binding regionChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
17 | nsv878680 | chr4:9802853-9907336 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
18 | nsv878681 | chr4:9802853-10397327 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
19 | nsv997941 | chr4:9805223-10493388 | Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 54 gene(s) | inside rSNPs | diseases |
20 | nsv1008649 | chr4:9805223-10589802 | Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
21 | nsv1000587 | chr4:9805223-10610752 | Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
22 | nsv537022 | chr4:9805223-10610752 | Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
23 | nsv1003454 | chr4:9805223-10710990 | Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
24 | nsv537023 | chr4:9805223-10710990 | Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
25 | nsv1001175 | chr4:9805668-9897520 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
26 | nsv1001832 | chr4:9811805-9897520 | ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
27 | nsv1004801 | chr4:9814720-10674528 | Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
28 | nsv537024 | chr4:9814720-10674528 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
29 | nsv931483 | chr4:9814721-10716463 | Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:9808200-9832000 | Weak transcription | Duodenum Mucosa | Duodenum |
2 | chr4:9808800-9834400 | Weak transcription | NHEK | skin |
3 | chr4:9810000-9830600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
4 | chr4:9811000-9827000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
5 | chr4:9813400-9826600 | Weak transcription | HepG2 | liver |
6 | chr4:9820200-9826400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
7 | chr4:9820200-9842600 | Weak transcription | HMEC | breast |
8 | chr4:9820400-9833400 | Weak transcription | Esophagus | oesophagus |
9 | chr4:9821000-9832400 | Weak transcription | Liver | Liver |
10 | chr4:9821400-9826800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
11 | chr4:9821600-9833200 | Weak transcription | Fetal Intestine Small | intestine |
12 | chr4:9822400-9828400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
13 | chr4:9823800-9836400 | Weak transcription | Left Ventricle | heart |
14 | chr4:9824000-9832400 | Weak transcription | Fetal Intestine Large | intestine |
15 | chr4:9824400-9828400 | Strong transcription | Primary monocytes fromperipheralblood | blood |