The 2.0 version of rSNPBase

Variant report

Variant rs206939
Chromosome Location chr6:34277752-34277753
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34251000-34283200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:34261800-34330800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr6:34262000-34282600 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr6:34262000-34282800 Weak transcription Primary T cells from cord blood blood
5 chr6:34262000-34283400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:34262000-34284600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr6:34262000-34286600 Weak transcription Gastric stomach
8 chr6:34262000-34289000 Weak transcription Hela-S3 cervix
9 chr6:34262000-34292800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:34262200-34295400 Weak transcription Duodenum Mucosa Duodenum
11 chr6:34262200-34301200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr6:34262800-34290800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:34263800-34282800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:34263800-34288400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr6:34264000-34282400 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr6:34264000-34299000 Weak transcription Dnd41 blood
17 chr6:34264600-34282400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr6:34264600-34284400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:34267400-34283400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr6:34268600-34278400 Weak transcription Primary hematopoietic stem cells blood
21 chr6:34268600-34283400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr6:34269400-34282200 Weak transcription Fetal Thymus thymus
23 chr6:34269400-34282400 Weak transcription Primary B cells from peripheral blood blood
24 chr6:34269600-34278400 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr6:34269600-34279600 Weak transcription NH-A brain
26 chr6:34269600-34280400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr6:34269600-34280600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:34269600-34286800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:34269800-34284200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:34270000-34282000 Weak transcription GM12878-XiMat blood
31 chr6:34270000-34283600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:34272600-34288200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:34273200-34278000 Enhancers Liver Liver
34 chr6:34273600-34283000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr6:34274000-34283600 Weak transcription Fetal Kidney kidney
36 chr6:34274200-34285000 Weak transcription Fetal Intestine Small intestine
37 chr6:34274200-34285000 Weak transcription HSMMtube muscle
38 chr6:34274400-34282600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:34274400-34282600 Weak transcription Brain Anterior Caudate brain
40 chr6:34274400-34306400 Weak transcription Brain Germinal Matrix brain
41 chr6:34274400-34309000 Weak transcription NHDF-Ad bronchial
42 chr6:34274600-34281000 Weak transcription Primary B cells from cord blood blood
43 chr6:34274600-34283000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr6:34274800-34285200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr6:34275000-34284200 Weak transcription Colon Smooth Muscle Colon
46 chr6:34275000-34285400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr6:34275200-34285800 Weak transcription Fetal Stomach stomach
48 chr6:34275200-34298000 Weak transcription Fetal Muscle Trunk muscle
49 chr6:34275400-34284400 Weak transcription Right Ventricle heart
50 chr6:34275400-34285200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015