The 2.0 version of rSNPBase

Variant report

Variant rs2094193
Chromosome Location chr13:48640231-48640232
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48612600-48640400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr13:48612600-48645000 Weak transcription Stomach Mucosa stomach
3 chr13:48612800-48640400 Weak transcription Psoas Muscle Psoas
4 chr13:48613000-48640400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr13:48613200-48640400 Weak transcription Fetal Heart heart
6 chr13:48613200-48641600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr13:48613200-48642200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr13:48613400-48641600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr13:48613400-48647000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr13:48613600-48645000 Weak transcription Small Intestine intestine
11 chr13:48616400-48642800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr13:48618800-48644800 Weak transcription Colonic Mucosa Colon
13 chr13:48623200-48652200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr13:48625800-48640400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr13:48627200-48640400 Weak transcription K562 blood
16 chr13:48627400-48640400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr13:48627400-48640400 Weak transcription Lung lung
18 chr13:48627400-48640800 Weak transcription Esophagus oesophagus
19 chr13:48627400-48642200 Weak transcription Brain Cingulate Gyrus brain
20 chr13:48627400-48644800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr13:48627400-48645000 Weak transcription Gastric stomach
22 chr13:48627400-48645200 Weak transcription Aorta Aorta
23 chr13:48627600-48640400 Weak transcription Brain Hippocampus Middle brain
24 chr13:48627600-48640400 Weak transcription Brain Inferior Temporal Lobe brain
25 chr13:48627600-48640400 Weak transcription Left Ventricle heart
26 chr13:48627600-48640600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr13:48627600-48641600 Weak transcription Muscle Satellite Cultured Cells --
28 chr13:48627600-48642200 Weak transcription Brain Substantia Nigra brain
29 chr13:48627800-48640400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr13:48627800-48640400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr13:48627800-48640400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr13:48627800-48644200 Weak transcription Spleen Spleen
33 chr13:48628200-48641200 Weak transcription Rectal Smooth Muscle rectum
34 chr13:48628200-48642800 Weak transcription NHLF lung
35 chr13:48628400-48640400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr13:48628400-48641000 Weak transcription Fetal Brain Male brain
37 chr13:48628400-48644200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr13:48628600-48641000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr13:48628800-48642000 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr13:48629000-48640400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr13:48630400-48640400 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr13:48631800-48640400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr13:48634600-48644800 Weak transcription Right Ventricle heart
44 chr13:48636400-48640400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr13:48636400-48640400 Strong transcription Dnd41 blood
46 chr13:48636400-48642400 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr13:48636600-48651400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr13:48636600-48655400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr13:48636800-48640600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr13:48637800-48640400 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015