The 2.0 version of rSNPBase

Variant report

Variant rs2147643
Chromosome Location chr9:115625643-115625644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115577600-115630400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr9:115582400-115630000 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr9:115594200-115634400 Weak transcription NH-A brain
4 chr9:115594400-115626800 Weak transcription Colon Smooth Muscle Colon
5 chr9:115601200-115641200 Weak transcription Fetal Brain Male brain
6 chr9:115602600-115626600 Weak transcription Brain Germinal Matrix brain
7 chr9:115602600-115626800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr9:115604000-115626600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr9:115607400-115643400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr9:115607600-115630200 Weak transcription NHEK skin
11 chr9:115611400-115628600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr9:115611400-115634600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr9:115611600-115626800 Weak transcription H9 Cell Line embryonic stem cell
14 chr9:115611600-115630200 Weak transcription H1 Cell Line embryonic stem cell
15 chr9:115611600-115634200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr9:115611800-115630200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr9:115612000-115634600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr9:115613600-115628200 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr9:115613600-115642600 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr9:115613800-115626600 Weak transcription Ovary ovary
21 chr9:115614000-115626800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr9:115614000-115632600 Weak transcription Placenta Amnion Placenta Amnion
23 chr9:115614200-115630200 Weak transcription Fetal Brain Female brain
24 chr9:115615200-115630200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr9:115615600-115626400 Weak transcription Brain Anterior Caudate brain
26 chr9:115615600-115626400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr9:115615600-115630000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr9:115615600-115630200 Weak transcription HMEC breast
29 chr9:115615600-115631000 Weak transcription Psoas Muscle Psoas
30 chr9:115615600-115639200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr9:115615600-115646400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr9:115615800-115628600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr9:115616000-115630000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr9:115616000-115631400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr9:115616800-115627000 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr9:115617000-115626400 Weak transcription Primary T cells fromperipheralblood blood
37 chr9:115617000-115626400 Weak transcription Esophagus oesophagus
38 chr9:115617000-115626400 Weak transcription Stomach Smooth Muscle stomach
39 chr9:115617000-115628600 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr9:115617000-115628800 Weak transcription Rectal Smooth Muscle rectum
41 chr9:115617000-115630200 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr9:115617200-115626400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr9:115617200-115626600 Weak transcription Gastric stomach
44 chr9:115617200-115626800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr9:115617200-115626800 Weak transcription Brain Angular Gyrus brain
46 chr9:115617200-115627400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr9:115617400-115626400 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr9:115617600-115629800 Weak transcription HSMMtube muscle
49 chr9:115617800-115626600 Weak transcription Pancreas Pancrea
50 chr9:115618000-115630200 Weak transcription HSMM muscle

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Last update: Aug 31, 2015