The 2.0 version of rSNPBase

Variant report

Variant rs7869100
Chromosome Location chr9:115628533-115628534
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115577600-115630400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr9:115582400-115630000 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr9:115594200-115634400 Weak transcription NH-A brain
4 chr9:115601200-115641200 Weak transcription Fetal Brain Male brain
5 chr9:115607400-115643400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr9:115607600-115630200 Weak transcription NHEK skin
7 chr9:115611400-115628600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr9:115611400-115634600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr9:115611600-115630200 Weak transcription H1 Cell Line embryonic stem cell
10 chr9:115611600-115634200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr9:115611800-115630200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr9:115612000-115634600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr9:115613600-115642600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr9:115614000-115632600 Weak transcription Placenta Amnion Placenta Amnion
15 chr9:115614200-115630200 Weak transcription Fetal Brain Female brain
16 chr9:115615200-115630200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:115615600-115630000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr9:115615600-115630200 Weak transcription HMEC breast
19 chr9:115615600-115631000 Weak transcription Psoas Muscle Psoas
20 chr9:115615600-115639200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr9:115615600-115646400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr9:115615800-115628600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr9:115616000-115630000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr9:115616000-115631400 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr9:115617000-115628600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr9:115617000-115628800 Weak transcription Rectal Smooth Muscle rectum
27 chr9:115617000-115630200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr9:115617600-115629800 Weak transcription HSMMtube muscle
29 chr9:115618000-115630200 Weak transcription HSMM muscle
30 chr9:115620600-115631000 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr9:115621200-115639400 Weak transcription Stomach Mucosa stomach
32 chr9:115621600-115629800 Strong transcription Fetal Intestine Small intestine
33 chr9:115623600-115630200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr9:115624200-115629200 Enhancers Adipose Nuclei Adipose
35 chr9:115624200-115652600 Weak transcription Fetal Heart heart
36 chr9:115624400-115630200 Weak transcription Right Ventricle heart
37 chr9:115624600-115628600 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr9:115624800-115630200 Weak transcription Muscle Satellite Cultured Cells --
39 chr9:115624800-115631200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr9:115624800-115635200 Strong transcription Primary T cells from cord blood blood
41 chr9:115625200-115629000 Strong transcription Fetal Intestine Large intestine
42 chr9:115625400-115629000 Strong transcription Aorta Aorta
43 chr9:115625400-115629400 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr9:115625600-115629800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr9:115625600-115630600 Enhancers Primary monocytes fromperipheralblood blood
46 chr9:115625600-115633400 Weak transcription Right Atrium heart
47 chr9:115625800-115630200 Weak transcription Left Ventricle heart
48 chr9:115625800-115645200 Weak transcription Thymus Thymus
49 chr9:115626000-115636200 Weak transcription NHLF lung
50 chr9:115626200-115629000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015