Variant report

Variant	rs2147944
Chromosome Location	chr10:23433127-23433128
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10741016	0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10764390	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10828413	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1886940	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2031572	0.96[ASN][1000 genomes]
rs2147943	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2296468	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.89[AMR][1000 genomes]
rs4264069	0.90[ASN][1000 genomes]
rs4506535	0.94[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6482254	0.83[CHB][hapmap]
rs7893600	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7909107	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7911227	0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23432800-23433600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:23433000-23437200	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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