The 2.0 version of rSNPBase

Variant report

Variant rs2296468
Chromosome Location chr10:23408139-23408140
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:23385800-23409400 Weak transcription NH-A brain
2 chr10:23386000-23412000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr10:23386400-23409600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr10:23386400-23411200 Weak transcription Primary B cells from peripheral blood blood
5 chr10:23386400-23411200 Weak transcription Muscle Satellite Cultured Cells --
6 chr10:23386600-23410600 Weak transcription Fetal Thymus thymus
7 chr10:23386600-23412200 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr10:23387200-23411400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr10:23389400-23410600 Weak transcription Stomach Mucosa stomach
10 chr10:23389600-23409000 Weak transcription Placenta Amnion Placenta Amnion
11 chr10:23389600-23418600 Weak transcription H9 Cell Line embryonic stem cell
12 chr10:23390000-23408200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:23390000-23411800 Weak transcription HUVEC blood vessel
14 chr10:23390200-23409800 Weak transcription Small Intestine intestine
15 chr10:23392400-23410800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr10:23392800-23410800 Strong transcription Primary T cells from cord blood blood
17 chr10:23392800-23410800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr10:23393000-23410600 Strong transcription Fetal Stomach stomach
19 chr10:23393200-23410800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr10:23393200-23410800 Strong transcription Duodenum Mucosa Duodenum
21 chr10:23393200-23411000 Strong transcription Adipose Nuclei Adipose
22 chr10:23393200-23411000 Strong transcription Liver Liver
23 chr10:23393600-23410800 Strong transcription Fetal Muscle Leg muscle
24 chr10:23393800-23410800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr10:23394000-23408200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr10:23395800-23414800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr10:23396000-23410600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr10:23398800-23409800 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr10:23400400-23408800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr10:23400600-23409400 Weak transcription HepG2 liver
31 chr10:23400600-23410600 Weak transcription NHDF-Ad bronchial
32 chr10:23401600-23410800 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr10:23402200-23413400 Weak transcription Brain Germinal Matrix brain
34 chr10:23402400-23410600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr10:23402600-23412000 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr10:23404000-23411200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr10:23404200-23411000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:23404200-23411200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr10:23404400-23409400 Weak transcription Primary hematopoietic stem cells blood
40 chr10:23404400-23409600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr10:23404800-23410800 Weak transcription Primary B cells from cord blood blood
42 chr10:23405200-23409800 Strong transcription Placenta Placenta
43 chr10:23405200-23410800 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr10:23405400-23410800 Strong transcription Primary neutrophils fromperipheralblood blood
45 chr10:23405400-23410800 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr10:23405600-23410800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr10:23406200-23408800 Weak transcription Psoas Muscle Psoas
48 chr10:23406400-23409600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr10:23406400-23410600 Strong transcription Primary monocytes fromperipheralblood blood
50 chr10:23406600-23410600 Strong transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015