Variant report

Variant	rs2170801
Chromosome Location	chr3:69302010-69302011
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10049245	1.00[AMR][1000 genomes]
rs10049350	1.00[AMR][1000 genomes]
rs10779991	1.00[AMR][1000 genomes]
rs1351791	1.00[AMR][1000 genomes]
rs1351792	1.00[AMR][1000 genomes]
rs2872809	1.00[AMR][1000 genomes]
rs4855378	1.00[AMR][1000 genomes]
rs4855379	1.00[AMR][1000 genomes]
rs7619331	1.00[AMR][1000 genomes]
rs7627121	0.92[AFR][1000 genomes]
rs9310145	1.00[AMR][1000 genomes]
rs9841198	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69281200-69303400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr3:69293000-69343400	Weak transcription	HSMM	muscle
3	chr3:69293400-69305200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr3:69293400-69339200	Weak transcription	Aorta	Aorta
5	chr3:69296600-69310400	Weak transcription	Primary hematopoietic stem cells	blood
6	chr3:69298000-69302200	Weak transcription	NHEK	skin
7	chr3:69298000-69329600	Weak transcription	Dnd41	blood
8	chr3:69298200-69302200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr3:69298200-69308400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:69299200-69309200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr3:69299400-69309200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:69299400-69331400	Weak transcription	HUVEC	blood vessel
13	chr3:69299600-69303200	Enhancers	Fetal Intestine Small	intestine
14	chr3:69299600-69303600	Weak transcription	Liver	Liver
15	chr3:69299600-69305000	Weak transcription	Fetal Thymus	thymus
16	chr3:69299600-69309200	Weak transcription	Lung	lung
17	chr3:69299600-69320600	Weak transcription	Brain Substantia Nigra	brain
18	chr3:69299800-69302600	Enhancers	Fetal Intestine Large	intestine
19	chr3:69300000-69305000	Weak transcription	Brain Hippocampus Middle	brain
20	chr3:69301000-69308400	Weak transcription	Fetal Lung	lung
21	chr3:69301200-69304600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr3:69301400-69302600	Enhancers	HMEC	breast
23	chr3:69301600-69302200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr3:69301600-69302600	Enhancers	Small Intestine	intestine
25	chr3:69301600-69302800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr3:69301600-69305000	Weak transcription	Fetal Heart	heart
27	chr3:69301600-69309000	Weak transcription	Placenta	Placenta
28	chr3:69302000-69302200	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr3:69302000-69303600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
30	chr3:69302000-69308200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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