Variant report

Variant	rs9841198
Chromosome Location	chr3:69303350-69303351
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10049245	1.00[AMR][1000 genomes]
rs10049350	1.00[AMR][1000 genomes]
rs10779991	1.00[AMR][1000 genomes]
rs1351791	1.00[AMR][1000 genomes]
rs1351792	1.00[AMR][1000 genomes]
rs2170801	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2872809	1.00[AMR][1000 genomes]
rs4855378	1.00[AMR][1000 genomes]
rs4855379	1.00[AMR][1000 genomes]
rs6773288	1.00[ASN][1000 genomes]
rs7619331	1.00[AMR][1000 genomes]
rs7627121	0.84[AFR][1000 genomes]
rs9310145	1.00[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:69281200-69303400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr3:69293000-69343400	Weak transcription	HSMM	muscle
3	chr3:69293400-69305200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr3:69293400-69339200	Weak transcription	Aorta	Aorta
5	chr3:69296600-69310400	Weak transcription	Primary hematopoietic stem cells	blood
6	chr3:69298000-69329600	Weak transcription	Dnd41	blood
7	chr3:69298200-69308400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:69299200-69309200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr3:69299400-69309200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr3:69299400-69331400	Weak transcription	HUVEC	blood vessel
11	chr3:69299600-69303600	Weak transcription	Liver	Liver
12	chr3:69299600-69305000	Weak transcription	Fetal Thymus	thymus
13	chr3:69299600-69309200	Weak transcription	Lung	lung
14	chr3:69299600-69320600	Weak transcription	Brain Substantia Nigra	brain
15	chr3:69300000-69305000	Weak transcription	Brain Hippocampus Middle	brain
16	chr3:69301000-69308400	Weak transcription	Fetal Lung	lung
17	chr3:69301200-69304600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr3:69301600-69305000	Weak transcription	Fetal Heart	heart
19	chr3:69301600-69309000	Weak transcription	Placenta	Placenta
20	chr3:69302000-69303600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr3:69302000-69308200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr3:69302600-69305000	Weak transcription	Fetal Intestine Large	intestine
23	chr3:69302600-69322800	Weak transcription	HMEC	breast
24	chr3:69302600-69322800	Weak transcription	NHEK	skin
25	chr3:69302800-69322800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr3:69303200-69305400	Weak transcription	Fetal Intestine Small	intestine
27	chr3:69303200-69309000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links