Variant report
| Variant | rs2172388 |
|---|---|
| Chromosome Location | chr18:30046481-30046482 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:30031200-30048400 | Weak transcription | Fetal Muscle Leg | muscle |
| 2 | chr18:30031400-30048200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr18:30031800-30046800 | Weak transcription | Stomach Mucosa | stomach |
| 4 | chr18:30033600-30048600 | Weak transcription | Aorta | Aorta |
| 5 | chr18:30040600-30047400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr18:30040800-30047200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 7 | chr18:30040800-30048200 | Weak transcription | Fetal Intestine Small | intestine |
| 8 | chr18:30041400-30048200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 9 | chr18:30041400-30048600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 10 | chr18:30042000-30048200 | Weak transcription | Colon Smooth Muscle | Colon |
| 11 | chr18:30042400-30048000 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr18:30042600-30046800 | Weak transcription | Brain Hippocampus Middle | brain |
| 13 | chr18:30042600-30047200 | Weak transcription | Brain Anterior Caudate | brain |
| 14 | chr18:30042600-30047200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 15 | chr18:30042600-30047800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 16 | chr18:30043000-30048600 | Weak transcription | Esophagus | oesophagus |
| 17 | chr18:30043400-30048600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr18:30044000-30048200 | Enhancers | Liver | Liver |
| 19 | chr18:30044400-30046600 | Weak transcription | Psoas Muscle | Psoas |
| 20 | chr18:30045000-30048200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 21 | chr18:30045000-30048200 | Enhancers | Fetal Brain Male | brain |
| 22 | chr18:30045200-30046600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 23 | chr18:30045600-30046600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr18:30045600-30047000 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr18:30045600-30047000 | Weak transcription | Gastric | stomach |
| 26 | chr18:30045600-30048200 | Weak transcription | Ovary | ovary |
| 27 | chr18:30045800-30046600 | Weak transcription | Right Ventricle | heart |
| 28 | chr18:30045800-30048000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr18:30045800-30048200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 30 | chr18:30045800-30049400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 31 | chr18:30046000-30048000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 32 | chr18:30046000-30048000 | Weak transcription | HepG2 | liver |
| 33 | chr18:30046000-30048600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 34 | chr18:30046000-30049000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr18:30046200-30046600 | Weak transcription | Pancreas | Pancrea |
| 36 | chr18:30046400-30047200 | Enhancers | Fetal Heart | heart |
| 37 | chr18:30046400-30048400 | Enhancers | Brain Substantia Nigra | brain |
